Geometricopticalconfocality
Optical slice thickness (depth discrimination) and stray light
suppression (contrast improvement) are basic properties of
a confocal LSM, even if the pinhole diameter is not an
ideal point (i.e. not infinitely small). In this case, both depth
discrimination and stray light suppression are determined
exclusively by PSF
det
. This alone brings an improvement in
the separate visibility of object details over the conventional
microscope.
Hence, the diameter of the corresponding half-intensity
area and thus the optical slice thickness is given by:
Equation (4) shows that the optical slice thickness comprises
a geometric-optical and a wave-optical term. The wave-
optical term (first term under the root) is of constant value
for a given objective and a given emission wavelength.
The geometric-optical term (second term under the root)
is dominant; for a given objective lens it is influenced ex-
clusively by the pinhole diameter.
13
Fig.9 Optical slice thickness as a function of the pinhole diameter
(red line). Parameters: NA = 0.6; n = 1;
λ
= 520 nm.
The X axis is dimensioned in Airy units, the Y axis (slice thickness)
in Rayleigh units (see also: Details “Optical Coordinates”).
In addition, the geometric-optical term in equation 4 is shown
separately (blue line).
λ
em
= emission wavelength
PH = object-side pinhole diameter [µm]
n
= refractive index of immersion liquid
NA = numerical aperture of the objective
Likewise, in the case of geometric-optical confocality, there
is a linear relationship between depth discrimination and
pinhole diameter. As the pinhole diameter is constricted,
depth discrimination improves (i.e. the optical slice thick-
ness decreases). A graphical representation of equation (4)
is illustrated in figure 9. The graph shows the geometric-
optical term alone (blue line) and the curve resulting from
eq. 4 (red line). The difference between the two curves is
a consequence of the waveoptical term.
Above a pinhole diameter of 1 AU, the influence of diffrac-
tion effects is nearly constant and equation (4) is a good
approximation to describe the depth discrimination. The
interaction between PSF
ill
and PSF
det
becomes manifest only
with pinhole diameters smaller than 1 AU.
Let it be emphasized that in case of geometric optical con-
focality the diameters of the half-inten sity area of PSF
det
allow no statement about the separate visibility of object
details in axial and lateral direction.
In the region of the optical section (FWHM
det,axial
), object
details are resolved (imaged separately) only unless they are
spaced not closer than described by equations (2) / (2a) / (3).
seite 7
PSF
tot
(x,y,z) = PSF
ill
(x,y,z)
.
PSF
det
(x,y,z)
seite 9
FWHM
ill,axial
=
seite 11
FWHM
det,axial
=
0.88 .
em
n- n
2
-NA
2
+
2 . n . PH
NA
2
2
0.88 .
exc
(n- n
2
-NA
2
)
5
1.77 . n .
exc
NA
2
FWHM
ill,lateral
= 0.51
exc
NA
seite 12
PSF
tot
(x,y,z) =
(
PSF
ill
(x,y,z)
)
2
em
.
exc
2
exc
+
2
em
5
2
FWHM
tot,axial
=
0.64 .
(n- n
2
-NA
2
)
5
1.28 . n .
NA
2
FWHM
tot,lateral
= 0.37
NA
(4)
FWHM [RU]
Pinhole diameter [AU]
7.0
6.3
5.6
4.9
4.2
3.5
2.8
2.1
1.4
0.7
0
1.2 1.48 1.76 2.04 2.32 2.6 2.88 3.16 3.44 3.72 4.0
OpticalImageFormation
PART 1
Содержание LSM 880
Страница 1: ...LSM 880 LSM 880 NLO Operating Manual October 2014 ZEN 2 black edition...
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Страница 651: ...Confocal Laser Scanning Microscopy Stefan Wilhelm Carl Zeiss Microscopy GmbH Carl Zeiss Promenade 10 07745 Jena Germany...
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