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3
OMNICxi Software Operation
Acquire and Analyze Data
140
DXRxi User Guide
Thermo Scientific
MCR Profile Settings
The MCR profile finds components in the sample data based on their (calculated) pure
component spectra and shows their locations in the chemical image. Click a point in the
chemical image to display the spectrum acquired at that location and its associated pure
component spectrum in the spectral pane.
If OMNICxi has associated spectral libraries, the found MCR components are searched
against those libraries automatically. To see search results for the displayed pure component
spectrum, click
below the spectral pane. The search results
window appears above the button. The name of the best matched spectrum from the available
spectral libraries appears at the top of the search results window and its spectrum is added to
the spectral pane. After you close the search results window, the library spectrum disappears
from the spectral pane.
for details about the search results.
Figure 84.
MCR profile settings
Table 32.
Peak position profile settings
Profile Type
Description
Range start/end
Defines the location of the region of interest. To specify the region, select
the
Spectrum tool
,
then click a point of interest in the chemical
image. The spectrum collected at that location is displayed in the spectral
pane. Enter X-axis start and end locations in their respective boxes or
drag the left and right facing triangle tools in the spectral pane to mark
the region start and end.
Tip
To zoom the spectrum, use the mouse to draw a box around the
region, then click inside the box.
Intensity
Threshold
Specifies a peak height value below which this profile will report 0. This
eliminates peaks below a certain size to prevent reporting noise when the
peak of interest is not present in the spectra.
Summary of Contents for DXR xi
Page 12: ...1 Introducing the DXRxi Raman Imaging System Trademarks 6 DXRxi User Guide Thermo Scientific...
Page 14: ...2 DXRxi Microscope Operation 8 DXRxi User Guide Thermo Scientific...
Page 64: ...Safety Information 58 DXRxi User Guide Thermo Scientific Microscope Safety Labels or...
Page 65: ...Safety Information Thermo Scientific DXRxi User Guide 59...
Page 66: ...Safety Information 60 DXRxi User Guide Thermo Scientific...
Page 67: ...Safety Information Thermo Scientific DXRxi User Guide 61...
Page 68: ...Safety Information 62 DXRxi User Guide Thermo Scientific...
Page 166: ...3 OMNICxi Software Operation Acquire and Analyze Data 160 DXRxi User Guide Thermo Scientific...