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NimbleGen MS 200 Microarray Scanner Operator’s Manual v1.0
To load an image associated with the current session, go to the slide row
in the Magazine Control and click the
Display Images
button ( ) in
the slide’s
Display Images
column. The image appears in the Image
View.
To use the scan area(s) provided by an existing area file:
If you are confident with the scan area(s) saved to an area file, you can apply
the settings in the file.
1.
Click
Load
in the Area Definition Control (Figure 28).
2.
Select and open the area file.
3.
Click
Apply
to confirm your selection.
6.2 Specifying Multiple Scan Areas
If you are using NimbleScan software for data analysis, Roche
NimbleGen recommends specifying a single scan area instead of
multiple scan areas. For NimbleGen multiplex arrays, you use the
software’s burst functionality to create individual image files for the
arrays.
To identify multiple areas:
1.
If necessary, highlight the slide row in the Magazine Control (Figure
24).
2.
If necessary, open the Parameter Control (Figure 25).
3.
If necessary, open the Area Definition Control (Figure 29).
4.
Select the
Multi Area
option button.
A magenta feature rectangle and a white scan area rectangle are
displayed. Both bounding rectangles are merged at their top-left corners
to capture and select multiple scan areas.
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