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USE OF THE PATCH CLAMP – A TUTORIAL
Axopatch 200B, Copyright 1997-1999, Axon Instruments, Inc.
Pipette Offset Adjustment
These are done exactly as described in the
Single Channel Recording
section in the
TUTORIAL
. By the end of the pipette offset adjustment procedure a number of front panel
controls will be changed from the above list. These include: MODE will be switched from
TRACK to V-CLAMP, SEAL TEST will be ON, and OUTPUT GAIN will change from 1
to 5.
Whole-Cell Capacitance Compensation
There are a variety of approaches for adjusting the parameters to cancel whole-cell capacity
transients. The approach we suggest here works well and is convenient for rapid and
complete cancellation of whole-cell transients.
1) Select the whole-cell (resistive feedback) mode. (Set CONFIG. to WHOLE CELL
(
β
= 1); set MODE to V-CLAMP; set METER to I.)
2) Attach the model cell to the headstage input in the CELL position. Insure that 60 Hz
interference is sufficiently small. If necessary, this can be achieved by shielding with
aluminum foil. If necessary, adjust PIPETTE OFFSET knob to zero the METER
reading.
3) For a Config. setting of W. Cell
β
= 1 (500 M
Ω
feedback resistor), a gain setting of 0.5
is convenient; for a Config. setting of W. Cell
β
= 0.1 (50 M
Ω
feedback resistor) set
the gain at 5.
4) Begin with the PIPETTE CAPACITANCE COMPENSATION controls fully off
(counter-clockwise). Both WHOLE-CELL PARAMETERS should be off,
i.e.
,
WHOLE CELL CAP. and SERIES RESISTANCE potentiometers should be fully
turned counterclockwise, and the WHOLE CELL CAP. switch should be OFF.
PREDICTION and CORRECTION should also be OFF.
5) Be sure that the HOLDING COMMAND switch is off and turn on the EXT.
COMMAND switch. Apply a square wave with a frequency of about 50 Hz and an
amplitude of about 2 V to the EXT. COMMAND input. (Alternatively, if a pulse
generator is not conveniently available you can use the SEAL TEST.) Trigger the
scope from the external source. This will produce large transients followed by steps in
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