Prism6 & Crystal Reader software User Manual
38
Figure 26: Settings page for a non-logged user in the Crystal Reader software.
o
Description of the fields:
•
User Settings:
-
Input Storage Path: default storage path to select the experiment
templates (i.e., the
“.ncx” files which may be loaded in the “Experiment
Details” form), the spillover compensation matrices (i.e., the “.ncm” files
which may be loaded for fluorescence spillover compensation in the
“Experiment Details” form), and the image analysis Configurations (i.e.,
the
“.yaml” files which may be loaded for image analysis Configuration in
the “Experiment Details” form).
-
Output Storage Path: default storage path to save the
“.ncx” experiment
files
-
Username: chosen username
-
Password: chosen password
•
Prism6 Settings:
-
Focus Value (mm): z-distance to the imaging plane used for image
acquisition (set by the user).
-
Prism6 Serial Number (SN): unique serial number of the Prism6 (set by
Stilla Technologies).
•
“Focus Calibration” button: advanced functionality to automatically adjust the
focus value for the image acquisition process (available only for the lab manager)
Note: If the Crystal Reader software is operated without logging in, only the paths to
output and input storage can be modified, and this configuration will not be saved for
the next session of the Crystal Reader software.
Settings: logged user
with “Basic” profile
