Optics
Scattered light matches the wavelength of the laser light, which is deflected by the particles it
encounters. Scattering depends on a particle’s physical properties, such as size, shape, surface
topography, and internal complexity.
Excitation by the laser light can cause particles to emit fluorescent light from three sources:
n
added fluorochromes or dyes
n
naturally occurring fluorescence
n
biological structures such as mitochondria and lysosomes (autofluorescence)
Emitted fluorescent light is of lower energy (longer wavelength) than excitation light. Mirrors, optical
filters, and lenses direct the fluorescent light to the detectors.
Forward Scatter
Laser light diffracted by particles in the forward direction (just off the axis of the laser beam) is
collected to give an indication of relative differences in particle size. This forward-scattered light (FSC)
is proportional to particle surface area or size. FSC can be used to distinguish debris from cells or
other target particles; it can also be used to generate a doublet discrimination plot that distinguishes
single particles from multiple particles passing through an interrogation point.
The ZE5 Cell Analyzer can include up to two FSC detectors. Both are highly sensitive PMTs with
adjustable voltage.
The default FSC detector measures 488 nm light from 2–18° relative to the laser beam. It can resolve
cells from debris and measure particles from 0.5–50 μm in diameter. Typical uses include generation
of plots of lysed whole blood suspensions to resolve lymphocytes, monocytes, and granulocytes with
high fidelity.
A second optional detector can be configured for small particle analysis or for measuring forward
scatter generated by a different laser. The small particle option can resolve particles as small as 0.3
µm in diameter.
Each FSC detector can be associated with a mechanical, software-controlled 2.0 neutral density (ND)
filter to alter the range of detection sensitivity. This filter can be enabled or disabled using the Everest
PMT Control panel. See
PMT and Laser Controls on page 258
.
Side Scatter
Light scattered by particles at an angle of about 90° to the laser beams is collected to indicate relative
differences in particle complexity (for example, granularity, membrane structure, and cytoplasmic
constituents). More complex particles usually reflect and refract more light than less complex particles,
User Guide | 37
Summary of Contents for ZE5
Page 1: ...ZE5 Cell Analyzer and Everest Software User Guide Version 2 0 ...
Page 2: ......
Page 3: ...ZE5 Cell Analyzer and Everest Software User Guide Software Version 2 0 ...
Page 14: ...Table of Contents xii ZE5 Cell Analyzer and Everest Software ...
Page 50: ...Chapter 2 Hardware Description 48 ZE5 Cell Analyzer and Everest Software ...
Page 82: ...Chapter 4 Everest Software 80 ZE5 Cell Analyzer and Everest Software ...
Page 84: ...Chapter 4 Everest Software 82 ZE5 Cell Analyzer and Everest Software ...
Page 92: ...Chapter 4 Everest Software 90 ZE5 Cell Analyzer and Everest Software ...
Page 104: ...Chapter 4 Everest Software 102 ZE5 Cell Analyzer and Everest Software ...
Page 109: ...Managing Users 9 Click OK to save the new user account User Guide 107 ...
Page 120: ...Chapter 5 Configuring the System 118 ZE5 Cell Analyzer and Everest Software ...
Page 125: ...Working with Optical Filter Configurations User Guide 123 ...
Page 126: ...Chapter 5 Configuring the System 124 ZE5 Cell Analyzer and Everest Software ...
Page 177: ...Setting Up the Run List User Guide 175 ...
Page 191: ...Setting Up the Run List User Guide 189 ...
Page 276: ...Chapter 7 Creating Experiments and Workspaces 274 ZE5 Cell Analyzer and Everest Software ...
Page 295: ...Setting Up the Experiment 6 Set up samples User Guide 293 ...
Page 333: ...Decontaminating the System User Guide 331 ...
Page 392: ...Appendix F References 390 ZE5 Cell Analyzer and Everest Software ...
Page 397: ......