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application (and still keep other applications running) you will need to select 
Connect in the application you wish to connect to the Cary. 

 

Zero: 

Select this to zero the current ordinate value using the Start wavelength 

(or equivalent) value set in the Cary tab of the Setup dialog box. The Cary will 

change to this wavelength if currently idling at a different value. Function key is 
F5.

 

Goto: 

Select this to display the Goto Wavelength dialog box and change the 

instrument to a new wavelength. Function key is F4.

 

This option is only available 

if the instrument is not currently collecting data.

 

Align: 

 This moves the Cary spectrophotometer to 0 nm (white light). You can 

then use this light for aligning accessories. Do not choose this without blocking 
the sample and reference slots to the integrating sphere.

 

Lamps Off: 

Switches off all lamp sources.

 

Lamps On: 

 Switch on selected lamps.

 

Graph menu 

The Graph menu allows you to view data in various graphical formats or in multiple 

graphs in the Graphics area. You can double-click on the Graphics area to toggle the 
display through graph and report to graph only. 
The graph functions can also be accessed by: 

 

clicking one of the Toolbar buttons.  

 

right-clicking in a graph box or the Graphics area.  

Not all functions are available on every menu. 
 

Note

 

The red trace in any graph box is the one for which all information appears and the 
one used for cursor tracking. It is called the focused trace. 

If you hold the cursor over a trace, bubble text identifying the trace is shown. 

Under the Graph menu, you can change both the Trace and Graph Preferences 

Trace Preferences: 

Select to display the 

Trace Preferences

 window to choose the 

trace(s) to display in the selected graph.

 

Graph Preferences: 

Select to display the 

Graph Preferences

 dialog box and change the 

appearance of your graph. 

 

See Appendix C for more option under the Graph menu as well as the Trace Preferences 
and Graph Preferences menus 

Storing Data 

Under the File menu you can save your Method (the Setup configuration used to 
perform the scan), your Data, or the combination of the Method and Data as a Batch file.   

File, Save Method As  

Summary of Contents for Cary 5000

Page 1: ...n on computer 2 Check lens and mirror are correct for your measurement a Install Small Sample Kit mirror M3 SSK or regular M3 mirror if needed b If using SSK install correct lens L2 3 Make sure cover...

Page 2: ...e Turn on the instrument 0 I switch on the lower left side of the front of the instrument In the Scan program watch the lower left corner to see the status of the instrument When the traffic light is...

Page 3: ...mounts in front of the sample see Figure 4 There are three lenses that can be used again for the three positons marked as T C or R Each time the sample configuration is changed the optics need to be...

Page 4: ...T C and R for the three positions of the integrating sphere Also the large mirror M3 is switched out for a one with a different curvature this mirror is always kept in the T position regardless of the...

Page 5: ...on located in the upper left hand corner defines the scan parameters The following useful tabs can be found under Setup Cary tab Here you can set the units of the x and y axes nm cm 1 etc and A T R et...

Page 6: ...be applied to a sample where the abscissa range of the sample exceeds that of the baseline If you change your abscissa range to one outside that of the baseline the Cary will display an error message...

Page 7: ...x at the end of a collect where you can enter the Batch file name for your data Note In the Scan application Prompt at Start and Prompt at End save information as a DSW file unless there are multi or...

Page 8: ...multiple graphs in the Graphics area You can double click on the Graphics area to toggle the display through graph and report to graph only The graph functions can also be accessed by clicking one of...

Page 9: ...ich Text Format file How to Export Collected Data If you want to export data from a Cary WinUV application into a third party application then save your data as an ASCII CSV file To do this 1 Click Fi...

Page 10: ...eck box is not checked 8 In the File name field type in the file name for your new batch file 9 Click Save to create the new batch file The current method will be stored with the batch files All the d...

Page 11: ...SBW will change automatically to maintain the required signal level If you are collecting data in double beam mode across the UV Vis and NIR regions with Fixed SBW set as the Measurement Mode then you...

Page 12: ...nes for another Scan run you simply open the file using either the File Open Data command or click the Baseline button in the Baseline tab of the Setup dialog box Note If you decide that you do not wa...

Page 13: ...gle bounce relative SRA accessories should not use this correction Select a Baseline Zero correction instead This correction is performed with the raw transmission data and due to the double bounce on...

Page 14: ...owever sometimes you may notice that the text has turned to gray and is in italics This indicates that the Cary is currently idling outside the abscissa range of the baseline file but that the current...

Page 15: ...ferences and Graph Preferences options 1 Graph menu options Print XY point Select this to print the cursor s current X and Y coordinates in the report area This option is only available when right cli...

Page 16: ...to Arrange Graphs Select Auto Arrange Graphs to view and arrange all graphs simultaneously Copy Graph Select this to copy the Graphics area onto the Windows Clipboard Paste to Graph Select this to pas...

Page 17: ...in traces You can resize the Name of Trace and File name fields by selecting and dragging the splitter bar between the fields File Name This field displays the file name and path of the trace If the n...

Page 18: ...il the font is changed again Trace Style This field allows you to define the way that your trace will appear on screen Points Each individual data point collected by the Cary is shown on the graph Poi...

Page 19: ...e right side of each graph box A single click on a sample name or example line within the legend will make it the focused or red scan Information about the trace will be displayed below the X axis Dou...

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