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RES-22XR3 Installation Manual - Configuration 1

Version 1.3

Index-4

Themis Computer

32-Bit Data Transfer

Block

DMA Mode

LBA/Large Mod

PIO Mode

S.M.A.R.T. For Storage Drives

3-16

Type

3-14

IDE/SATA Configuration

Configure SATA#1 as

Fourth IDE Master

ICH AHCI Code Base

ICH RAID Code Base

IDE Detect Timeout

Primary IDE Master/Slave

3-14

SATA#1 Configuration

3-13

SATA#2 Configuration

3-14

Secondary IDE Master/Slave

3-14

Third IDE Master

3-14

Installation procedures

2-1

installing rack-mount slides

B-1

memory modules

2-4

PCI cards

2-7

Intel 5520 (Tylersburg) chipset

1-10

Intel 5520 chipset

1-2

Intel’s SATA RAID

3-14

Intelligent Platform Management Interface

3-25

IPMI Configuration

IPMI Firmware Revision

3-25

Status of BMC

3-25

IPMI dedicated Ethernet LAN port

A-4

IPMI Dedicated LAN Port

IRQ

iSCSI

keys, storage drive

L2 cache

LAN port

latch locks

LEDs

NIC1 (Gb Ethernet)

NIC2 (Gb Ethernet)

SAS/SATA storage drives (HDD)

system

Linux Installation

Creating a Custom Layout screen

C-9

Edit Interface Pop-Up Screen

C-13

Enter Installation Number screen

C-6

Installation Begins screen

C-18

Installation is Complete screen

C-19

Language Selection screen

C-4

C-20

Master Boot Record (MBR) screen

C-11

Network Devices List screen

C-12

Option to Review or Continue screen

C-18

Optional Packages screen

C-17

Package Installation Default Screen

C-16

Partitioning screen

C-7

Power On screen

C-2

Ready to use the Desktop screen

C-20

Reviewing Option screen

C-8

Selecting Layout Type screen

C-5

Selecting Time Zone screen

C-14

Setting Up Boot Loader screen

C-10

Setting Up Root Account and Password

screen

Skip Key screen

Welcome Screen

lithium battery

installation

lithium battery and socket, illustration of

2-8

removal

2-8

MADT

3-8

Main BIOS Setup Screen

3-3

Main Switch Override Mechanism

1-13

Major Components

1-6

Manual Part Number ii
memory

1-2

Memory Capacity

2-3

Memory Mode

Summary of Contents for RES-22XR3

Page 1: ...Installation Manual Installation Manual 2RU 19 Rack Mount Rugged Enterprise Server with X8DTH iF X8DTH 6F Motherboard Configuration Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs Configuratio...

Page 2: ...3 Configuration 1 RES 22XR3 Configuration 1 Two Quad Dual Core 5500 or Quad Six Core 5600 Xeon CPUs RES 22XR3 Configuration 1 RES 22XR3 Configuration 1 Two Quad Dual Core 5500 or Quad Six Core 5600 Xe...

Page 3: ...4 77 80 Fax 33 476 14 77 89 Themis Computer Americas and Pacific Rim 47200 Bayside Parkway Fremont CA 94538 Phone 510 252 0870 Fax 510 490 5529 World Wide Web http www themis com RES 22XR3 Installatio...

Page 4: ...uter Inc Intel and Xeon are registered trademarks of Intel Corporation Red Hat is a registered trademark of Red Hat Inc Linux is a registered trademark of Linus Torvalds SuperMicro is a registered tra...

Page 5: ...structed airflow to the chassis Added note to Main Switch Override Mechanism page 1 13 stating all RES units leave the factory with ATX compliant power supplies installed Added Winbond WPCM450 Control...

Page 6: ...and moved existing Appendix E to Appendix F Assorted minor edits and changes throughout the manual Version 1 1 December 2010 Added figures of both Standard and Front I O RES 32 Chassis in Preface Adde...

Page 7: ...disconnected from the power source Therefore the power cord and its connectors must always remain easily accessible Do not set up the device in the proximity of heat sources or in a damp location Make...

Page 8: ...deral Regulations 21 CFR 1040 for the USA and Canadian Radiation Emitting Devices Act REDR C 1370 Electrostatic Discharge ESD A sudden discharge of electrostatic electricity can destroy static sensiti...

Page 9: ...uipment 6 Keep the work area free of non conductive materials such as ordinary plastic as sembly aids and Styrofoam 7 Use field service tools such as cutters screwdrivers and vacuums that are con duct...

Page 10: ...viii Themis Computer RES 22XR3 Installation Manual Configuration 1 Version 1 3...

Page 11: ...Monitoring 1 11 1 5 1 Fan Status Monitor with Firmware Control 1 11 1 5 2 Environmental Temperature Control 1 11 1 5 3 System Resource Alert 1 12 1 6 ACPI Features 1 12 1 6 1 Slow Blinking LED for Su...

Page 12: ...Opening the RES 22XR3 Front Doors 2 9 2 1 5 2 Storage Drive Removal 2 10 2 1 5 3 Storage Drive Installation 2 11 2 1 6 Removable 80 mm Fan 2 12 2 1 6 1 Removing and Installing a 80 mm Fan 2 13 2 1 7...

Page 13: ...1 10 Restore on AC Power Loss 3 7 3 3 2 Processor and Clock Options 3 7 3 3 2 1 CPU Ratio 3 7 3 3 2 2 Clock Spread Spectrum 3 7 3 3 2 3 Hardware Prefetcher 3 7 3 3 2 4 Adjacent Cache Line Prefetch 3 7...

Page 14: ...ad Size 3 12 3 3 3 17 USB Functions 3 13 3 3 3 18 USB 2 0 Controller 3 13 3 3 3 19 Legacy USB Support 3 13 3 3 3 20 Port 64 60 Emulation 3 13 3 3 4 IDE SATA Configuration 3 13 3 3 4 1 SATA 1 Configura...

Page 15: ...rt 3 20 3 3 7 8 Sredir Memory Display Delay 3 20 3 3 8 Hardware Health Monitor 3 20 3 3 8 1 CPU Overheat Alarm 3 20 3 3 8 2 CPU 1 Temperature CPU 2 Temperature System Temperature 3 21 3 3 8 3 Voltage...

Page 16: ...3 4 5 Change User Password 3 30 3 4 6 Clear User Password 3 30 3 4 7 Password Check 3 30 3 4 8 Boot Sector Virus Protection 3 30 3 5 Boot Configuration 3 31 3 5 1 Boot Device Priority 3 31 3 5 2 Stor...

Page 17: ...D 1 D 1 Remote On Off Configuration D 1 D 2 Remote On Only Configuration D 2 D 3 Ordering the Remote On Off Switch D 2 Appendix E Optional RES Audio USB Serial Port Module E 1 E 1 RES Audio USB Serial...

Page 18: ...xvi Themis Computer RES 22XR3 Installation Manual Configuration 1 Version 1 3...

Page 19: ...S 22 Open Top View 1 6 Figure 1 6 RES 22XR3 with Front Sound Baffle Installed Front View 1 17 Figure 1 7 RES 22XR3 with Rear Sound Baffle Installed Rear View 1 18 Figure 2 1 Remove the RES 22XR3 Prote...

Page 20: ...Flash Recovery 3 39 Figure A 1 USB Connector Pinout A 2 Figure A 2 COM1 Serial Connector A 2 Figure A 3 RES 22XR3 SVGA Connector Pinout A 3 Figure A 4 Ethernet Connector Type RJ45 A 4 Figure B 1 Scre...

Page 21: ...Remote On Off Switch Module D 1 Figure E 1 RES Audio USB Serial Port Custom Module E 1 Figure E 2 Install the RES Audio USB Serial Port Custom Module E 2 Figure E 3 Attach the Appropriate I O Cables...

Page 22: ...Optimal Memory Population Two CPUs Installed 2 3 Table 3 1 PIO Mode Select Options 3 15 Table 3 2 DMA Mode Select Options 3 16 Table A 1 PS 2 Keyboard Mouse Pinouts and Signal Definitions A 1 Table A...

Page 23: ...ch is based on two 64 bit Intel 5500 Series XeonTM Quad Dual Core CPUs or two Intel 5600 Series Xeon Quad Six Core CPUs RES 22XR3 Configuration 1 supports one of two motherboards in a 20 chassis Super...

Page 24: ...024 117019 024 Configuration 5 X8DAi X8DA3 2 117025 024 117020 024 Configuration 6 X8DAH F 2 117026 024 117021 024 Configuration 7 X8DTU F 117280 024 116970 024 Naming Key X8Dvwxyz System RES x2XR3 w...

Page 25: ...117411 024 117415 024 117419 024 X8SAX 1 117420 024 117421 024 X8ST3 F X8STE 1 117385 024 117422 024 X8STi X8STi F X8STi LN4 X8STi 3F 1 118188 024 117423 024 Naming Key X8uvwxyz System RES x2XR3S and...

Page 26: ...front I O RES 32 chassis Figure 5 shows the rear view Table 3 Front I O 16 Deep Chassis Manual Matrix Mother board CPU Soc kets RES 32XR3 FIO Manual P N RES 22XR3 FIO Manual P N X8DAH F 2 117611 024 X...

Page 27: ...Preface xxv Themis Computer Figure 3 Rear View of a Standard Rear I O RES 22 Chassis Figure 4 Front View of a Front I O RES 22 Chassis Figure 5 Rear View of a Front I O RES 22 Chassis...

Page 28: ...odules The RES 22XR3 is based on the functionality and capability of the follow ing Intel chipset Intel 5520 Tylersburg chipset ICH10R IOH 36D An overview of RES 22XR3 design and specifications is giv...

Page 29: ...ult in damage to the equipment This may involve but is not restricted to heavy equipment or sharp objects To reduce the risk follow the instructions accompanying this symbol Warning A warning describe...

Page 30: ...RES 22XR3 Installation Manual Configuration 1 Version 1 3 xxviii Themis Computer...

Page 31: ...o Intel 1366 pin LGA 64 bit 5500 5600 Series Xeon processors each with a QPI Quick Path Interconnect up to 6 4 GT s Giga Transfers per Second supporting 192 GB of 1333 1066 800 MHz DDR3 ECC Registered...

Page 32: ...2 240 pin DIMM sockets supporting up to 192GB 16GB DIMMs of 1333 1066 800 MHz DDR3 ECC Registered Memory Expansion slots 7 PCI Express 2 0 x8 all in x16 slots Rear Panel I O See Table 1 5 on page 1 9...

Page 33: ...3 4 5 6 7 LAN3 Intel 82576 LAN LAN1 LAN2 Intel 5520 IOH2 36D Intel 5520 IOH1 36D Ports 3 4 Ports 5 6 Ports 7 8 Ports 9 10 Ports 1 2 Ports 3 4 Ports 5 6 Ports 7 8 U3H1 ESI Ports 1 2 Ports 9 10 Intel I...

Page 34: ...supply modules with latch locks and power cord sock ets and all I O connectors See Figure 1 4 Major internal components of the RES 22XR3 can be seen in the open top view cover removed shown in Figure...

Page 35: ...n page 1 8 I O connectors are described in Table 1 5 page 1 9 Figure 1 4 RES 22 System LEDs and I O Connectors Configuration 1 I O Connectors PS 2 Keyboard IPMI Dedicated LAN COM 1 Port PS 2 Mouse VGA...

Page 36: ...tal of 3 Air Flow Deflector AC Power Supply 12 DIMM Memory Modules underneath AC Power Supply Rear I O Slots 1 to 7 PCI Slot 1 2 3 4 5 6 PCI Express 2 0 x8 PCI Express 2 0 x8 PCI Express 2 0 x8 PCI Ex...

Page 37: ...to the AC power Or On red LED Power Fail LED Left or Right Power Supply a Note system is powered off AC power has been inter rupted to both power sup ply modules When power is restored but system is...

Page 38: ...rature limits are ex ceeded Warns that the system is exceeding specified temperature parameters The CPU overheat warning function must be enabled in the BIOS thus allowing the user to define an overhe...

Page 39: ...Serial Ports Two 4 pin USB connectors to attach serial devices to USB Port 0 and USB Port 1 Note Five additional USB ports can be accessed directly from the motherboard COM 1 Serial Port One DB9 male...

Page 40: ...irs of unidirec tional differential lanes for transmission and receiving in addition to a differential forwarded clock A full width QuickPath interconnect link pair provides 84 signals Each processor...

Page 41: ...M CPU2 DIMM 1 1V 1 5V 1 8V 3 3V 12V 5V 3 3 Vsb and VBAT Once a voltage becomes unstable a warning is given or an error message is sent to the screen Users can adjust the voltage thresholds to define t...

Page 42: ...are interface that provides a standard way to integrate power management features throughout a PC system including its hard ware operating system and application software This enables the system to au...

Page 43: ...y storage drive controller industry standard 82077 765 compatible a data separator write pre compensation circuitry decode logic data rate selection clock generator drive interface control logic inter...

Page 44: ...Controller BMC that supports the 2D VGA compatible Graphics Core with the PCI interface Virtual Media and Keyboard Video Mouse Redirection KVMR modules With blade ori ented Super I O capability built...

Page 45: ...5 kg 19 Rack Mountable with Slide capability Left and right rack mount tabs attached to chassis Left and right rack mount slides are optional Temperaturea Operating Non Operating 0 up to 55 C 32 up t...

Page 46: ...AC 120 volts 750W DC 48 volts 750W DC 28 volts 500W Input Power typical 370 watts typical b 370 watts typical b 450 watts typical c Input Current 3 5 amperes 120 Vac 13 5 amperes 48 Vdc 16 amperes 28...

Page 47: ...tion It is possible to achieve fur ther noise reduction by installing a sound baffle muffler on both the front see Fig ure 1 6 and the rear see Figure 1 7 on page 1 18 of the RES 22 chassis Call your...

Page 48: ...ng the protective top cover for access to the interior requires that the rear sound baffle be totally removed this can be done with the baffle door closed To do this five 5 M3x4 flathead Phillips scre...

Page 49: ...1 10 1 Accessory Kit Each RES 22XR3 is packaged with an Accessory Kit consisting of the following items A Two AC Power Cords B Two storage drive Barrel Keys When you unpack the RES 22XR3 please verify...

Page 50: ...supplies RES 12XR3 S 17 lbs 7 7 kg 2 17 RES 11XR3 16 5 lbs 7 5 kg 1 17 RES 22XR3 25 lbs 11 4 kg 2 20 Includes All CPU sockets filled 6 DIMMs 2 storage drives 2 PCI cards 1 CD RW DVD ROM drive 2 power...

Page 51: ...oceed directly to page 2 9 page 2 12 or page 2 14 respectively Replacement of motherboard components however requires removal of the protective cover 2 1 1 Remove Protective Top Cover To access a moth...

Page 52: ...e B Figure 2 1 Remove the cover by sliding it toward the rear until it is free of these chassis slots 3 Store the cover in a safe place until it is replaced 4 Proceed to the appropriate section to ins...

Page 53: ...the minimal requirements of your OS It is strongly recommended that you do not mix memory modules of different speeds sizes voltages and vendors Table 2 1 RES 22XR3 Memory Capacity Motherboard Memory...

Page 54: ...22XR3 chassis see Figure 2 2 Screw A After removing the single screw A remove the PCI card retainer bracket and store it in a safe place Screw B Remove the seven 7 M3x4 flathead screws marked B in Fig...

Page 55: ...on remove it by gently pressing down and outward on the latches at both ends of the slot see Figure 2 4 on page 2 6 then pulling the old module directly up from the slot until it is free of the connec...

Page 56: ...d press firmly downward until it snaps into place 5 If all the memory modules have been replaced in the system replace the air flow diverter and secure it with the seven screws previously removed in S...

Page 57: ...rled screw on the PCI card clamp see A Figure 2 6 2 Swing the PCI card clamp away from the top of the chassis exposing the tops of the PCI card I O panels see B Figure 2 6 3 Locate the empty slot with...

Page 58: ...cover removed in Section 2 1 1 Remove Protective Top Cover on page 2 1 2 1 4 Lithium Battery 2 1 4 1 Removing the Lithium Battery Perform the following steps to remove the lithium battery CR2032 1 Mak...

Page 59: ...which may be either SAS X8DTH 6F motherboard only or SATA The front doors of the RES 22XR3 must be unlocked and opened to access the storage drives see Figure 2 8 2 1 5 1 Opening the RES 22XR3 Front...

Page 60: ...ch handle releases away from the drive see B in Figure 2 10 5 Grab the latch handle and pull the drive completely away from its slot see C in Figure 2 10 Figure 2 9 Unlocking the RES 22XR3 Storage Dri...

Page 61: ...the front of the chassis The handle will swing closed when it comes into contact with the RES 22XR3 chassis 4 When the drive is fully inserted in its slot insert the key into the barrel lock and turn...

Page 62: ...When replacing the 80 mm fans do not leave the fan lid open for more than 3 minutes as this will cause an undesirable drop in chassis pressure bad for temperature stability In the event of a catastrop...

Page 63: ...of the fan and pull the fan directly upward from the RES 22XR3 chassis 3 When the fan is removed its 4 wire connector will be disconnected from the chassis Insert the replacement fan carefully into t...

Page 64: ...1 Removing a Power Supply Perform the following steps to remove a power supply 1 Unplug the power cord s from the socket s in the power supply module s 2 Remove the two screws holding the power suppl...

Page 65: ...Caution When pulling the power supply from the chassis hold it at the bot tom to prevent it from falling and damaging the unit Figure 2 14 The RES 22XR3 Power Supply Locking Mechanism Extraction Handl...

Page 66: ...pply into an empty slot with the extraction handle and AC outlet facing to the right see Figure 2 14 2 Push the power supply carefully into its slot until it is firmly seated a click will be heard whe...

Page 67: ...2 Rack Mount Slides Optional Rack Mount Slides can be mounted on each side of the RES 22XR3 for the purpose of sliding the unit in and out of a rack Mounting slides are optional and should be ordered...

Page 68: ...2 Turning the System On 1 Plug the AC power cord from each of the RES 22XR3 power supplies into a live AC outlet 2 On the front of the RES 22XR3 push the system power On Off button see Figure 2 17 Th...

Page 69: ...ailed in Appendix C Red Hat Enterprise Linux 5 Installation 2 3 4 Turning the System Off 1 To turn the RES 22XR3 power off press the system power on off button see Figure 2 17 page 2 18 This will shut...

Page 70: ...2 20 Themis Computer RES 22XR3 Installation Manual Configuration 1 Version 1 3...

Page 71: ...the options that can be configured Grayed out options cannot be configured Options in blue can be config ured by the user The right frame displays the key legend Above the key legend is an area reserv...

Page 72: ...st As the memory is being tested press the Delete key to enter the main menu of the AMI BIOS Setup Utility From the main menu you can access the other setup screens An AMI BIOS identification string i...

Page 73: ...screen is shown below 3 2 1 System Time System Date Use this option to change the system time and date Highlight System Time or System Date using the arrow keys Key in new values through the keyboard...

Page 74: ...used in your system CPU Type This item displays the type of CPU used in the motherboard Speed This item displays the speed of the CPU detected by the BIOS Physical Count This item displays the number...

Page 75: ...kip certain tests during POST to reduce the time needed for system boot The options are Enabled default and Disabled 3 3 1 2 Quiet Boot This option allows the bootup screen options to be modified betw...

Page 76: ...sk function When this item is set to Enabled the ROM BIOS of the host adaptors will capture Interrupt 19 at boot and allow the drives that are attached to these host adaptors to function as bootable d...

Page 77: ...and Manual 3 3 2 2 Clock Spread Spectrum Select Enable to use the feature of Clock Spectrum which will allow the BIOS to monitor and attempt to reduce the level of Electromagnetic Interference caused...

Page 78: ...operating systems and applications in independent partitions creat ing multiple virtual systems in one physical computer The options are Enabled default and Disabled 3 3 2 8 Execute Disable Bit Capab...

Page 79: ...ormance The options are Enabled default and Disabled 3 3 2 13 C1E Support Select Enabled to use the feature of Enhanced Halt State C1E significantly reduces the CPU s power consumption by reducing the...

Page 80: ...remain slow safe mode and cannot be selected by the user If Full speed is selected the following item will be available for the user to select the QPI frequency The options are Slow Mode and Full Spe...

Page 81: ...he Processor The options are Enabled and Disabled default 3 3 3 7 Patrol Scrubbing A memory error correction scheme that works in the background looking for and correcting resident errors The options...

Page 82: ...ions are 8 16 32 default 40 48 56 64 72 80 88 96 104 112 and 120 3 3 3 14 Intel VT d Select Enabled to enable Intel s Virtualization Technology support for Direct I O VT d by reporting the I O device...

Page 83: ...0 Emulation Select Enabled to enable 60h 64h emulation for complete USB keyboard support for operating systems that are not compatible with USB devices The options are Enabled and Disabled default 3 3...

Page 84: ...onfiguration This feature is available when the option IDE is selected for SATA 1 Selecting Enhanced will set SATA 2 to native SATA mode The options are Dis abled and Enhanced default 3 3 4 6 IDE Dete...

Page 85: ...o allow data to be transferred from and to the device one sector at a time Select Auto to allow data transfer from and to the device occur multiple sectors at a time if the device supports it The opti...

Page 86: ...rive support Select Disabled to prevent the AMI BIOS from using the S M A R T Select Enabled to allow the AMI BIOS to use the S M A R T to sup port the storage drive The options are Disabled Enabled a...

Page 87: ...This feature sets the latency Timer of each PCI device installed on a PCI bus Select 64 to set the PCI latency to 64 PCI clock cycles The options are 32 64 default 96 128 160 192 224 and 248 3 3 5 4...

Page 88: ...The options are Enabled default and Disabled 3 3 5 11 Boot Graphics Adapter Priority This feature allows the user to specify which graphics controller is to be used as the primary boot graphics contro...

Page 89: ...for Console Redirec tion The options are COM 1 and COM 2 default Base Address IRQ This item displays the based address and IRQ of the serial port specified above The default setting for COM 1 is 3F8 I...

Page 90: ...mory information The options are No Delay default Delay 1 Sec Delay 2 Sec and Delay 4 Sec 3 3 8 Hardware Health Monitor This feature allows the user to monitor system health and review the status of e...

Page 91: ...y the BIOS Low This level is considered as the normal operating state The CPU tem perature is well below the CPU Temperature Tolerance The motherboard fans and CPU will run normally as configured in t...

Page 92: ...us rather than by just simply seeing a temperature reading i e 25 C The information provided above is for your reference only For more information on thermal management please refer to Intel s Web sit...

Page 93: ...for your system 3 3 9 1 ACPI Aware O S Enable ACPI support if it is supported by the OS to control ACPI through the Oper ating System Otherwise disable this feature The options are Yes default and No...

Page 94: ...A OS Select NUMA for SLES 11 for better CPU perfor mance on a SUSE Linux Enterprise Server 11 The options are Enabled default Disabled and NUMA for SLES 11 3 3 9 8 WHEA Support Select Enabled to activ...

Page 95: ...tions are Don t Change default Enabled and Disabled TPM Enable Disable Status This item displays the status of TPM Enabled Disabled state TPM Owner Status This item displays the status of TPM Ownershi...

Page 96: ...sion Event Sensor Type Event Sensor Number Event Dir Type Event Data 3 3 12 1 Clear BMC System Event Log Select OK and press the Enter key to clear the BMC system log Select Cancel to keep the BMC Sys...

Page 97: ...hine This should be in decimal and in dotted quad form i e 192 168 10 253 The value of each three digit number separated by dots should not exceed 255 Subnet Mask Subnet masks tell the network which s...

Page 98: ...on 3 3 14 1 View Event Log Use this option to view the System Event Log 3 3 14 2 Mark all events as read This option marks all events as read The options are OK default and Cancel 3 3 14 3 Clear event...

Page 99: ...s if a Supervisor password has been entered for the system Not Installed means a Supervisor password has not been used 3 4 2 User Password This item indicates if a user password has been entered for t...

Page 100: ...ange User Password Select this feature and press Enter to access the submenu and then type in a new User Password 3 4 6 Clear User Password Available only when User Password has been set This item all...

Page 101: ...f priority for the Boot Device The settings are 1st boot device 2nd boot device 3rd boot device 4th boot device 5th boot device and Disabled 3 5 2 Storage Drives This feature allows the user to specif...

Page 102: ...t boot device 2nd boot device and Disabled 1st Drive USB XXXXXXXXX 3 5 4 CD DVD Drives This feature allows the user to specify the boot sequence from available CD DVD Drives i e 1st Drive 2nd Drive et...

Page 103: ...this option to leave the BIOS Setup Utility and reboot the computer so the new system configura tion parameters can take effect Select Save Changes and Exit from the Exit menu and press Enter 3 6 2 D...

Page 104: ...Defaults from the Exit menu and press Enter Then select OK to allow the AMI BIOS to automatically load Optimal De faults to the BIOS Settings The Optimal settings are designed for maximum system perf...

Page 105: ...he file SUPER ROM for the recovery process to load the file A USB flash device such as a USB Flash Drive a USB CDROM or a USB CDRW device can be used for this purpose 1 Insert the USB device that cont...

Page 106: ...ROM for the recovery process to load the file 3 7 4 Boot Sector Recovery from a Serial Port Serial Flash This process also known as Serial Flash allows the user to use a serial port to load a BIOS im...

Page 107: ...ages Press SpaceBar to update BIOS Confirm update BIOS y n y Begin remote BIOS flash y n y Starting remote flash Upload new BIOS file using Xmodem protocol 6 Following the instructions given on the sc...

Page 108: ...end File dialog under the Transfer menu follow the instructions below to com plete XModem transfers a Select the Transfer menu and enter Send b Specify the location of the ROM file and select the prop...

Page 109: ...ash is completed the system will reboot Figure 3 8 Flash Recovery Note AMIBIOS Serial Flash will work with any terminal communications pro gram that supports VT 100 and XModem protocols including prot...

Page 110: ...3 40 Themis Computer RES 22XR3 Installation Manual Configuration 1 Version 1 3...

Page 111: ...d Mouse The RES 22XR3 provides a 6 pin female mini DIN connector for the PS 2 key board and another for the PS 2 mouse Pinouts and signal definitions for both con nectors are defined in Table A 1 Tabl...

Page 112: ...descriptions are listed in Table A 2 A 3 Serial Ports The RES 22XR3 supports one male DB9 serial port connector on the rear I O panel see Figure A 2 TTYA COM1 COM1 pinout signal descriptions are liste...

Page 113: ...Display Port 1 5 6 10 11 15 Table A 4 RES 22XR3 SVGA Connector Pin Signals Pin VGA Signal Description Pin VGA Signal Description 1 RED OUT Red signal output 9 VCC Filtered Vcc voltage source 2 GREEN O...

Page 114: ...rt on the RES 22XR3 rear I O panel has identical pinout and signal descriptions as the LAN 1 and LAN 2 Ethernet ports described in the previous Section A 5 Gigabit Ethernet LAN Port Figure A 4 Etherne...

Page 115: ...nt slide kit steel slides require four mounting holes and aluminum slides require three mounting holes see Figure B 1 Dimensions of the screw hole patterns on the sides of the RES 22XR3 chassis for in...

Page 116: ...t and rear slide brackets to the outside slide section using the screws washers and nuts provided with the slide kit 4 With all slide brackets securely attached to both the right and left outside slid...

Page 117: ...ion washers and nuts included in slide kit Attach the rear long slide bracket to the outside slide section with screws washers and nuts included in slide kit Attach both inside slide sections to the l...

Page 118: ...Themis Computer RES 22XR3 Installation Manual Configuration 1 Version 1 3 B 4...

Page 119: ...u during the installation of Red Hat Enterprise Linux via DVD device From fundamental concepts such as installation preparation to the step by step installation procedure C 2 Installation Step 1 Inser...

Page 120: ...Configuration 1 Version 1 3 C 2 Themis Computer Step 2 Press the tab key to move focus to the Skip key then press Enter key to Con tinue see Figure C 2 Figure C 1 Power On after Linux DVD is Inserted...

Page 121: ...on see Figure C 3 Click on the Next button to continue Step 4 Using your mouse select a language to use for the installation The language you select here will become the default language for the opera...

Page 122: ...you select the appropriate language click Next to continue Step 5 Using your mouse select the correct layout type for example U S English for the keyboard you would prefer to use for the installation...

Page 123: ...xt to continue Step 6 Enter the installation number if you don t have an installation number select the Skip Entering Installation Number Radio Button Click OK and if you did not enter an installation...

Page 124: ...partition using the Create custom layout option of Disk Druid The first three options allow you to perform an automated installation without having to parti tion your drive s yourself If you do not f...

Page 125: ...n to remove only Linux partitions partitions created from a previous Linux installation This does not remove other partitions you may have on your storage drive s such as VFAT or FAT32 partitions Use...

Page 126: ...ep 9 If you chose one of the automatic partitioning options and selected Review you can either accept the current partition settings click Next or modify the setup using Disk Druid the manual partitio...

Page 127: ...partitions set up a boot loader If you select No Boot Loader will be Installed you ll need to use a third party boot loader such as Partition Magic or Microsoft s TLDR Unless you want to set up a Boot...

Page 128: ...ot loader unless the MBR already starts another operating system loader such as System Com mander The MBR is a special area on your storage drive that is automatically loaded by your com puter s BIOS...

Page 129: ...ly uses Red Hat Enterprise Linux you should choose the MBR Click the Change Drive Order button if you would like to rearrange the drive order or if your BIOS does not return the correct drive order Ch...

Page 130: ...the Edit Interface pop up screen you can choose to configure the IP address and Netmask for IPv4 Prefix for IPv6 of the device via DHCP or manually if DHCP is not selected and you can choose to activ...

Page 131: ...of the world see Fig ure C 14 on page C 14 From here there are two ways for you to select your time zone Using your mouse click on the interactive map to select a specific city represented by a yello...

Page 132: ...most important steps during your installation Your root account is similar to the administrator account used on Windows NT machines The root account is used to install packages upgrade RPMs and perfor...

Page 133: ...se Linux installation This screen varies depending on the version of Red Hat Enterprise Linux you are installing see Figure C 16 on page C 16 To customize your package set further select the Customize...

Page 134: ...e group has been selected if optional components are available you can click on Optional packages to view which packages are installed by default and to add or remove optional packages from that group...

Page 135: ...Next Step 18 Once you have selected the package groups of your choice you get one last chance to go back before starting the installation process Click Next if you re happy with your choices or click...

Page 136: ...22XR3 Installation Manual Configuration 1 Version 1 3 C 18 Themis Computer Click Next Step 19 Installation Starts see Figure C 19 Figure C 18 Option to Review or Continue Figure C 19 Installation Beg...

Page 137: ...p sequence has completed the graphical boot loader prompt appears at which you can do any of the following things Press Enter causes the default boot entry to be booted Select a boot label followed by...

Page 138: ...p 21 Eventually a login prompt or a GUI login screen if you installed the X Window System and chose to start X automatically appears see Figure C 21 Step 22 Once logged in you are ready to use the des...

Page 139: ...nal switch from which to remotely turn the RES 22XR3 for X8DTH iF 6F on or off are able to order a Remote On Off Switch module that is easily installed in an available storage drive bay see Figure D 1...

Page 140: ...ill gracefully shut down the system through the BIOS pressing the switch OFF for 4 seconds or more results in a hard power off equivalent to pulling the plug on the system D 2 Remote On Only Configura...

Page 141: ...port capabilities to the front of any RES system can easily order an optional RES Audio USB Serial Port Custom Module see Figure E 1 that is installed at the Themis factory into an available stor age...

Page 142: ...although the Module may be installed into any RES system Figure E 3 on page E 3 shows the internal connections that are made between the RES Custom Module and the RES motherboard Caution Because conn...

Page 143: ...igure E 3 Attach the Appropriate I O Cables DB9 Serial Port Attach the appropriate I O Cables from the USB Ports A and B Port A Port B Stereo Audio Out Jack Optional RES Custom Module J8 J2 J10 To RES...

Page 144: ...ial Port Custom Module supports two USB Universal Serial Bus port connectors see Figure E 4 for pinouts USB A and USB B on the front I O panel USB pinout descriptions are listed in Figure E 4 pinout s...

Page 145: ...e E 5 pinout signal descriptions are described in Table E 2 which also shows the serial header J8 connections to serial port J9 Figure E 5 COM1 Serial Connector Pinout J9 Serial Port COM1 J8 1 2 3 4 5...

Page 146: ...reo Audio Connector Pinout J3 Stereo Audio Out Jack J2 Line Out Header J1 1 3 5 7 9 J4 1 2 3 4 Line In Header USB to Audio Chip Header 5 1 2 4 3 No Connection Left Line Out Right Line Out Line In Left...

Page 147: ...E 2 Ordering the RES Audio USB Serial Port Custom Module Because internal modifications must be made to the RES chassis in order to support the RES Audio USB Serial Port Custom Module the Custom Modu...

Page 148: ...E 8 Themis Computer RES22XR3 Installation Manual Configuration 1 Version 1 3...

Page 149: ...om damage in transit If it becomes necessary to ship in packaging other than that provided by Themis equipment should be wrapped in a moisture resistant covering and placed either in double boxes or i...

Page 150: ...1 They comprise a packaging box bottom crush resistant layer and top crush resistant layer The bottom and top crush resistant layers are identi cal components each layer formed of two pieces of mater...

Page 151: ...tom of the box Place the equipment on top of the bottom layer right side up Place the other crush resistant layer membrane side down open side up on top of the equipment Press down on the top layer to...

Page 152: ...F 4 Themis Computer RES 22XR3 Installation Manual Configuration 1 Version 1 3...

Page 153: ...udio connectors E 3 Audio USB Serial Port Custom Module E 1 COM1 Serial Connector Pinout E 5 COM1 Serial Connector Pinout Signal Descriptions E 5 header connectors E 3 I O cables E 2 I O headers E 2 i...

Page 154: ...assword Check 3 30 Supervisor Password 3 29 User Access Level 3 30 User Password 3 29 Boot Configuration CD DVD Drives Retry Boot Devices 3 32 Boot Features AddIOn ROM Display Mode 3 6 Bootup Num Lock...

Page 155: ...Memory ECC Error Log 3 28 PCI Error Log 3 28 View Event Log 3 28 Exit Options Screen 3 33 Expansion slots 1 2 F Fan Removing and Installing a 80 mm Fan 2 13 Fan Status Monitor with Firmware Control 1...

Page 156: ...port A 4 latch locks 1 4 LEDs 1 5 NIC1 Gb Ethernet 1 8 NIC2 Gb Ethernet 1 8 SAS SATA storage drives HDD 1 8 system 1 4 Linux Installation 2 19 C 1 Creating a Custom Layout screen C 9 Edit Interface Po...

Page 157: ...ering the Remote On Off Switch D 2 Output Voltage 1 16 Overheat LED 1 8 P Packaging and Shipping 1 19 Packaging Components F 2 PC health monitoring 1 11 PCI card 2 2 PCI cards 1 4 2 1 2 7 PCI PnP Conf...

Page 158: ...3 14 rear panel 1 4 Rear Panel I O 1 2 Recovery from AC Power Loss 1 11 Red Hat Enterprise Linux C 1 Red Hat Enterprise Linux 5 Installation C 1 Remote Access Configuration Flow Control 3 19 Redirecti...

Page 159: ...urrent 1 16 Input Frequency 1 16 Input Leakage 1 16 Input Power 1 16 Input VA Rating 1 16 Input Voltage 1 16 Maximum Wet Bulb 1 15 Noise 1 17 Packaging and Shipping 1 19 Plug Type 1 16 Power Factor 1...

Page 160: ...mputing TCG TPM 3 24 TTYA COM1 A 2 Turning the System Off 2 19 Turning the System On 2 18 U UARTs 1 13 USB Connector Pinout Signal Descriptions A 2 USB Port A and Port B E 3 USB Ports A 2 E 4 USB port...

Page 161: ...ThemisComputer 47200BaysideParkway Fremont CA94538 Attn PublicationsDepartment Place Stamp Here Fold here tape at top to seal...

Page 162: ...an be improved ___________________________________________________________ ___________________________________________________________ ___________________________________________________________ _____...

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