background image

Page | 5  

 

 
 
The two buttons on the left side by the focus knob control the reflector turret 
and light path (this is far easier selected by Zen Black software on the PC). 

You can switch microscope objectives via the Zeiss microscope remote LCD 
station or within Zen Black software. 

There is no ‘definite focus’ autofocus hardware on the Elyra microscope. 

The tube lens can be 1x or 1.6x – always use the 1.6x with super-resolution. If 
the 1x tube lens is selected you can see the shadow of the 1.6x down the 
microscope (vanishes when the 1.6x is selected). 

You can do a multi-location time lapse with an identical z stack, and say a 3x3 
raster scan at each location in time-lapse.  

The Elyra isn’t a confocal and the Core’s Zeiss Spinning Disk confocal system 
should be more ‘gentle’ with live cells. Start with lower laser power as the 
Elyra has high powered lasers (around 100mW). 

 

 

 

 

 

Summary of Contents for ELYRA

Page 1: ...Page 1 Wellcome Trust Centre for Human Genetics Cellular Imaging Microscopy Core The Zeiss Elyra TIRF Confocal Abridged INSTRUCTIONS...

Page 2: ...super resolution with temperature control Plan Apochromat 10x NA 0 3 air objective Plan Apochromat 20x objective NA 0 8 air objective Alpha Plan Apochromat 100x NA 1 46 oil objective Andor iXon DU 89...

Page 3: ...ain with the camera it s locked in software The EM Gain going from 1 to 200 goes from the equivalent of second to a 20ms to frame rate Avoid putting too much light onto the cameras EMCCD sensor The EM...

Page 4: ...r use If you are using the heated incubator at 37oC you should switch on the incubator at least 2 hours before imaging For the most stable time lapse imaging at 37oC leave the incubator on overnight T...

Page 5: ...yra microscope The tube lens can be 1x or 1 6x always use the 1 6x with super resolution If the 1x tube lens is selected you can see the shadow of the 1 6x down the microscope vanishes when the 1 6x i...

Page 6: ...n OOO appears on the display this is the lamp intensity Press Up Down to select 0 12 25 50 and 100 lamp intensity Warning things can very bright down the eyepieces even with the standard FITC TRITC Fa...

Page 7: ...ails on the operation of the Elrya TIRF super resolution microscope see the Ziess Elyra manual and in particular the Elyra Quick Guide after chapter 7 of the manual a pdf download of the Quick Guide i...

Page 8: ...ith excitation light in combination with open close filter options in Zen Black 8 Ensure that the doors and viewing panels are closed on the black stage incubator or the lasers will switch off Wait 5...

Page 9: ...y possibility of damage during start up when the XY motorised stage initialises Note The top of the 100x objective rotates so avoid accidently turning it 4 Drop the 10x objective nearer to the Load lo...

Page 10: ...ave any microscope imaging problems or queries just ask a member of the Microscopy Core staff for help There is additional help and advice on our Core web pages http www well ox ac uk microscopy WTCHG...

Reviews: