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Chapter 5: Advanced Serverboard Setup

5-1

Chapter 5  

 

Advanced Serverboard Setup

This chapter covers the steps required to connect the data and power cables and 
install add-on cards. All serverboard jumpers and connections are also described. 
A layout and quick reference chart are included in this chapter for your reference. 

Remember to completely close the chassis when you have finished working with 

the serverboard to better cool and protect the system.

5-1  Handling the Serverboard

Electrostatic Discharge (ESD) can damage electronic com ponents. To prevent dam-
age to any printed circuit boards (PCBs), it is important to handle them very carefully 
(see previous chapter). To prevent the serverboard from bending, keep one hand 
under the center of the board to support it when handling. The following measures 

are generally sufficient to protect your equipment from electric static discharge.

Precautions

• 

Use a grounded wrist strap designed to prevent ESD.

• 

Touch a grounded metal object before removing boards from antistatic bags.

• 

Handle a board by its edges only; do not touch its components, peripheral chips, 
memory modules or gold contacts.

• 

When handling chips or modules, avoid touching their pins.

• 

Put the serverboard, add-on cards and peripherals back into their antistatic 
bags when not in use.

• 

For grounding purposes, make sure your computer chassis provides excellent 
conductivity between the power supply, the case, the mounting fasteners and 
the serverboard.

Unpacking

The serverboard is shipped in antistatic packaging to avoid electrical static dis-
charge. When unpacking the board, make sure the person handling it is static 
protected.

Summary of Contents for SUPERSERVER 6027R-72RFT+

Page 1: ...SUPERSERVER 6027R 72RFT SUPER USER S MANUAL 1 0...

Page 2: ...any such disputes Super Micro s total liability for all claims will not exceed the price paid for the hardware product FCC Statement This equipment has been tested and found to comply with the limits...

Page 3: ...board and the SC825TQ R740LPB chassis Chapter 2 Server Installation This chapter describes the steps necessary to install the SuperServer 6027R 72RFT into a rack and check out the server configuration...

Page 4: ...serverboard Chapter 6 Advanced Chassis Setup Refer to Chapter 6 for detailed information on the SC825TQ R740LPB server chas sis You should follow the procedures given in this chapter when installing...

Page 5: ...Notes Preface v...

Page 6: ...rview 2 1 2 2 Unpacking the System 2 1 2 3 Preparing for Setup 2 1 Choosing a Setup Location 2 1 Rack Precautions 2 2 Server Precautions 2 2 Rack Mounting Considerations 2 3 Ambient Operating Temperat...

Page 7: ...necting Cables 5 2 Connecting Data Cables 5 2 Connecting Power Cables 5 2 Connecting the Control Panel 5 2 5 3 Rear I O Ports 5 3 5 4 Installing the Processor and Heatsink 5 4 Installing an LGA 2011 P...

Page 8: ...rive Installation 6 5 Hard Drive Backplane 6 6 DVD ROM Installation Optional 6 6 6 5 Power Supply 6 7 Power Supply Failure 6 7 Removing Replacing the Power Supply 6 7 Chapter 7 BIOS 7 1 Introduction 7...

Page 9: ...he system www supermicro com In addition to the serverboard and chassis various hardware components have been included with the 6027R 72RFT as listed below Two passive CPU heatsinks SNK P0048P Three 8...

Page 10: ...66 800 type memory Both 1 5V and 1 35V DIMMs are supported Use of DDR3 1600 depends on memory configuration See Chapter 5 for details SAS A total of eight SAS ports are provided with an onboard LSI 22...

Page 11: ...without shutting down the system Hard Drive Subsystem The SC825TQ R740LPB chassis was designed to support eight hot swap SATA or SAS hard drives Front Control Panel The control panel on the SC825TQ R7...

Page 12: ...S CPU REAR CPU FRONT PEG1_8 PCI E x16 Slot USB REAR HDR 2X5 0 1 TPM HDR TYPE A REAR 2 3 QPI DDR3 DIMM B DDR3 DIMM D C U7C1 U6H1 H F E Socket 00 Socket 01 1 2 3 1 2 3 1 2 3 1 2 3 1 2 3 1 2 3 P0 P0 P1 P...

Page 13: ...per Micro Computer B V Het Sterrenbeeld 28 5215 ML s Hertogenbosch The Netherlands Tel 31 0 73 6400390 Fax 31 0 73 6416525 Email sales supermicro nl General Information support supermicro nl Technical...

Page 14: ...1 6 SUPERSERVER 6027R 72RFT User s Manual Notes...

Page 15: ...a suitable location for the rack unit that will hold the SuperServer 6027R 72RFT It should be situated in a clean dust free area that is well ventilated Avoid areas where heat electrical noise and el...

Page 16: ...er Always make sure the rack is stable before extending a component from the rack You should extend only one component at a time extending two or more si multaneously may cause the rack to become unst...

Page 17: ...omised Mechanical Loading Equipment should be mounted into a rack so that a hazardous condition does not arise due to uneven mechanical loading Circuit Overloading Consideration should be given to the...

Page 18: ...assembly consists of two sections an inner fixed chassis rail that secures directly to the server chassis and an outer fixed rack rail that secures directly to the rack itself Installing the Inner Ra...

Page 19: ...COMPLET 1 2 1 1 1 2 1 4 1 3 Separating the Inner and Outer Rails 1 Locate the rail assembly in the chassis packaging 2 Extend the rail assembly by pulling it outward 3 Press the quick release tab 4 S...

Page 20: ...ck end of the outer rail to the rack using the screws provided 2 Press the button where the two outer rails are joined to retract the smaller outer rail 3 Hang the hooks of the rails onto the rack hol...

Page 21: ...hassis into a Rack 1 Extend the outer rails as illustrated above 2 Align the inner rails of the chassis with the outer rails on the rack 3 Slide the inner rails into the outer rails keeping the pressu...

Page 22: ...2 8 SUPERSERVER 6027R 72RFT User s Manual Notes...

Page 23: ...specific components There are also two buttons on the chassis control panel 3 2 Control Panel Buttons There are two buttons located on the front of the chassis a reset button and a power on off butto...

Page 24: ...d be off when the system is operating normally Information LED This LED will be solid blue when the UID function has been activated When this LED flashes red it indicates a fan failure When red contin...

Page 25: ...ns on replacing failed SATA drives Red When this LED flashes it indicates the drive is rebuilding When solid on it indicates a SATA drive failure If a drive fails you should be notified by your system...

Page 26: ...SUPERSERVER 6027R 72RFT User s Manual 3 4 Notes...

Page 27: ...ou should first power down the system with the operating system first and then unplug the power cords of all the power supply units in the system When working around exposed electrical circuits anothe...

Page 28: ...ody which are excellent metal conductors that can create short circuits and harm you if they come into contact with printed circuit boards or areas where power is present Serverboard Battery CAUTION T...

Page 29: ...use Touch a grounded metal object before removing the board from the antistatic bag Do not let components or PCBs come into contact with your clothing which may retain a charge even if you are wearing...

Page 30: ...ictly followed Figure 4 1 Installing the Onboard Battery LITHIUM BATTERY BATTERY HOLDER BATTERY HOLDER LITHIUM BATTERY OR Please handle used batteries carefully Do not damage the battery in any way a...

Page 31: ...e hand under the center of the board to support it when handling The following measures are generally sufficient to protect your equipment from electric static discharge Precautions Use a grounded wri...

Page 32: ...AS drive data cables I SATA0 I SATA5 SAS0 SAS7 Control Panel cable JF1 USB cable for front side access USB4 5 Important Make sure the the cables do not come into contact with the fans Connecting Power...

Page 33: ...ED OH Fan Fail LED Power Fail LED Ground Ground 2 1 20 19 5 3 Rear I O Ports The I O ports are color coded in conformance with the PC 99 specification See Figure 5 2 below for the colors and locations...

Page 34: ...ing or changing any hardware components Make sure that you install the processor into the CPU socket before you install the CPU heatsink If you buy a CPU separately make sure that you use an Intel cer...

Page 35: ...remove the WARNING plastic cap from the socket 5 Use your thumb and index finger to hold the CPU by its edges Align the CPU keys which are semi circle cutouts against the socket keys 6 Once they are a...

Page 36: ...ck that the CPU is aligned properly 7 With the CPU in the socket in spect the four corners of the CPU to make sure that they are flush with the socket 8 Close the load plate Lock the lever labeled Clo...

Page 37: ...e heatsink on top of the CPU so that the four mounting holes are aligned with those on the Motherboard s and the Heatsink Bracket under neath 3 Screw in two diagonal screws i e the 1 and the 2 screws...

Page 38: ...rd in the sequence as shown in the illustration below 2 Gently wriggle the heatsink to loosen it from the CPU Do not use excessive force when wriggling the heatsink 3 Once the heatsink is loosened rem...

Page 39: ...ts slot Pay attention to the notch along the bottom of the module to avoid installing incorrectly see Figure 5 3 3 Use your thumbs to gently press down on both ends of the DIMM module until it snaps i...

Page 40: ...5 8 DIMMs CPU1 P1 DIMMA1 P1 DIMMB1 P1 DIMMC1 P1 DIMMD1 P1 DIMMA2 P1 DIMMB2 P1 DIMMC2 P1 DIMMD2 2 CPUs 4 DIMMs CPU1 CPU2 P1 DIMMA1 P1 DIMMB1 P2 DIMME1 P2 DIMMF1 2 CPUs 6 DIMMs CPU1 CPU2 P1 DIMMA1 P1 D...

Page 41: ...www supermicro com sup port resources mem cfm Populating RDIMM ECC Memory Modules Intel E5 2600 Series Processor RDIMM Memory Support Table Ranks Per DIMM Data Width Memory Capacity Per DIMM See the...

Page 42: ...1066 Note For detailed information on memory support and updates please refer to the SMC Recom mended Memory List posted on our website at http www supermicro com support resources mem cfm Other Impor...

Page 43: ...1 Begin by removing the shield for the PCI slot you wish to populate 2 Fully seat the card into the slot pushing down with your thumbs evenly on both sides of the card 3 Finish by using a screw to sec...

Page 44: ...7 SP1 JSD1 JPW1 JPW2 JPI2C1 JD1 JF1 X9DR7 TF Rev 1 00 BBU CPU2 SLOT3 PCI E 3 0 X16 I SATA4 L SAS 4 7 CPU1 SLOT4 PCI E 3 0 X8 CPU1 SLOT1 PCI E 3 0 X8 XDP CPU CPU1 SLOT2 PCI E 3 0 X8 USB9 I SATA3 I SATA...

Page 45: ...t Panel Control Header JIPMB1 4 pin External BMC I2 C Header for an IPMI Card JL1 Chassis Intrusion Header JOH1 Overheat LED Indicator JP6 Clock Power Supply I2 C Header JP7 PAT Power Supply I2 C Head...

Page 46: ...el USB Ports USB 2 3 Back Panel USB Ports USB 4 5 USB 6 7 Front Panel Accessible USB Headers USB 9 Front Panel Type A USB Ports UID Switch UID Unit Identifier Button VGA Backpanel VGA Port LED Descrip...

Page 47: ...5VSB 22 5V 10 12V 23 5V 11 12V 24 COM 12 3 3V Reset Button Pin Definitions JF1 Pin Definition 3 Reset 4 Ground Power Button Pin Definitions JF1 Pin Definition 1 Power Signal 2 Ground Secondary Power...

Page 48: ...Pin Definition 9 Vcc 10 Ground HDD LED Pin Definitions JF1 Pin Definition 13 Vcc 14 HD Active NIC2 JLAN2 LED The LED connections for JLAN2 are on pins 9 and 10 of JF1 Attach an LED cable to display ne...

Page 49: ...efinition 19 Control 20 Ground Fan Header Pin Definitions Pin Definition 1 Ground Black 2 12V Red 3 Tachometer 4 PWR Modulation Power On LED The Power On LED connector is lo cated on pins 15 and 16 of...

Page 50: ...se pins 6 7 See the table on the right for speaker pin definitions Speaker Connector Pin Settings Pin Setting Definition Pins 4 7 External Speaker Pins 6 7 Internal Speaker Internal Speaker The intern...

Page 51: ...he enclosure management chip on the backplane See the table on the right for pin definitions T SGPIO Header Pin Definitions Pin Definition Pin Definition 1 NC 2 NC 3 Ground 4 DATA Out 5 Load 6 Ground...

Page 52: ...finitions PWR SMBus Header Pin Definitions Pin Definition 1 Clock 2 Data 3 PWR Fail 4 Ground 5 3 3V Unit Identifier Switch The UID Switch is located next to the LAN 2 4 ports on the backplane The Rear...

Page 53: ...2 1 CMOS Clear JBT1 is used to clear CMOS which will also clear any passwords Instead of pins this jumper consists of contact pads to prevent accidentally clearing the contents of CMOS To clear CMOS...

Page 54: ...SAS Enable Jumper JPS1 allows the user to en able onboard LSI SAS support The default setting is on 1 2 to enable SAS connections 0 3 4 7 See the table on the right for jumper settings SAS Enable Jump...

Page 55: ...AN port is also located on the I O backplane The amber LED on the right indicates activity while the green LED on the left indicates the speed of the connec tion See the table at right for more inform...

Page 56: ...7 Ground Serial ATA Ports There are six Serial ATA Ports I SATA0 I SATA 5 located on the motherboard including four SATA2 ports and two SATA3 ports These ports provide serial link signal con nections...

Page 57: ...ed with your motherboard Driver Tool Installation Display Screen Note Click the icons showing a hand writing on paper to view the readme files for each item Click the computer icons to the right of th...

Page 58: ...nment and operations of your system SuperDoctor III displays crucial system information such as CPU temperature system voltages and fan status See the Figure below for a display of the SuperDoctor III...

Page 59: ...Interface Display Screen Remote Control Note The SuperDoctor III program and User s Manual can be downloaded from the Supermicro web site at http www supermicro com products accessories software Supe...

Page 60: ...5 30 SUPERSERVER 6027R 72RFT User s Manual Notes...

Page 61: ...o prevent damage to any printed circuit boards PCBs it is important to handle them very carefully The following measures are generally sufficient to protect your equipment from ESD damage Precautions...

Page 62: ...he connection Connect the cable from JF1 on the serverboard to the Control Panel PCB printed circuit board Make sure the red wire plugs into pin 1 on both connectors Pull all excess cabling out of the...

Page 63: ...till running to determine which of the fans has failed Replacing System Fans Removing a Fan 1 Remove the chassis cover 2 Press the tabs on the sides of the fan to unlock and remove the fan and its hou...

Page 64: ...supermicro com driver SAS LSI LSI_SAS_EmbMRAID_SWUG pdf and Supermicro s web site for additional inmformation http www supermicro com support manuals DVD ROM For installing removing the DVD ROM drive...

Page 65: ...located beside the drive s LEDs 2 Swing the handle fully out and use it to pull the drive carrier straight out see Figure 6 3 Mounting a Drive in a Drive Carrier 1 To add a new SAS SATA drive install...

Page 66: ...typically needed to mount a slim DVD ROM drive in the server Accessing the Inside of the Chassis 1 Grasp the two handles on either side and pull the unit straight out until it locks you will hear a c...

Page 67: ...ty meaning you can replace the failed unit without powering down the system Removing Replacing the Power Supply You do not need to shut down the system to replace a power supply module The backup powe...

Page 68: ...6 8 SUPERSERVER 6027R 72RFT User s Manual Notes...

Page 69: ...ll the options that can be configured Grayed out options cannot be configured Options in blue can be configured by the user The right frame displays the key legend Above the key legend is an area rese...

Page 70: ...ty From the main menu you can access the other setup screens An AMI BIOS identification string is displayed at the left bottom corner of the screen below the copyright message Warning Do not upgrade t...

Page 71: ...Tab key to move between fields The date must be entered in Day MM DD YY format The time is entered in HH MM SS format Note The time is in the 24 hour format For example 5 30 P M appears as 17 30 00 S...

Page 72: ...POST messages The op tions are Enabled and Disabled AddOn ROM Display Mode Use this item to set the display mode for the Option ROM Select Keep Current to use the current AddOn ROM Display setting Sel...

Page 73: ...Off the system will power off immediately as soon as the user presses the power button If this feature is set to 4 Seconds Override the system will power off when the user presses the power button for...

Page 74: ...or Socket 2 supports 64 bit technology Clock Spread Spectrum Select Enable to enable Clock Spectrum support which will allow the BIOS to moni tor and attempt to reduce the level of Electromagnetic Int...

Page 75: ...o use the Intel Advanced Encryption Standard AES New Instruc tions NI to ensure data security The options are Enabled and Disabled MLC Streamer Prefetcher Available when supported by the CPU If set to...

Page 76: ...isabled to disable power saving settings The options are Disabled Energy Efficient and Custom If the option is set to Custom the following items will display EIST Available when Power Technology is se...

Page 77: ...um system performance with maximum cooling or maximum energy efficiency with maxi mum power saving The fan speeds are controlled by the firmware management via IPMI 2 0 The options are Performance Bal...

Page 78: ...aring across Intel platforms providing greater reliability security and availability in networking and data sharing The options are Enabled and Disabled Intel I OAT Select Enabled to enable Intel I OA...

Page 79: ...ified above The options are Gen1 Generation 1 Gen2 and Gen3 CPU2 Slot 5 PCI E 3 0 x16 Link Speed This feature allows the user to set the PCI Exp bus speed for the slot specified above The options are...

Page 80: ...displays if memory sparing is supported by the motherboard Memory sparing enhances system performance DIMM Information The status of the memory modules detected by the BIOS will be displayed as detec...

Page 81: ...correctable memory errors detected on a memory module and send the correction to the requestor the original source When this item is set to Enabled the IO hub will read and write back one cache line...

Page 82: ...1 EHCI Controller 2 Available when All USB Devices is set to Enabled Select Enabled to enable EHCI Enhanced Host Controller Interface Controller 1 or Controller 2 The options are Disabled and Enabled...

Page 83: ...bled En hanced and Compatible The options for SATA Controller 1 are Disabled and Enhanced AHCI Mode The following items are displayed when the AHCI Mode is selected Aggressive Link Power Management Wh...

Page 84: ...are Enabled and Disabled SERR Generation Select Enabled to allow a PCI device to generate an SERR number for a PCI Bus Signal Error Event The options are Enabled and Disabled Maximum Payload Select A...

Page 85: ...a network device Select FCoE Fiber Channel over Ethernet to use a FCoE Option ROM to boot the computer using a network device The options are iSCSI and PXE and FCoE Load Onboard LAN1 Option ROM Load...

Page 86: ...8h IRQ 3 4 5 6 7 10 11 12 and IO 2E8h IRQ 3 4 5 6 7 10 11 12 Device Mode Use this feature to select the desired mode for a serial port specified The options are Normal and High Speed Serial Port 2 Con...

Page 87: ...er will exchange data with the client computer which is the remote computer used by the user Terminal Type This feature allows the user to select the target terminal emulation type for Con sole Redire...

Page 88: ...ol for Console Redirection to prevent data loss caused by buffer overflow Send a Stop signal to stop send ing data when the receiving buffer is full Send a Start signal to start sending data when the...

Page 89: ...or Con sole Redirection Select VT100 to use the ASCII character set Select VT100 to add color and function key support Select ANSI to use the extended ASCII character set Select VT UTF8 to use UTF8 en...

Page 90: ...tions are Enabled and Disabled High Precision Event Timer Select Enabled to activate the High Precision Event Timer HPET that produces periodic interrupts at a much higher frequency than a Real time C...

Page 91: ...is currently enabled or disabled TPM Active Status This item displays the status of TPM Support to indicate if TPM is currently ac tive or deactivated TPM Owner Status This item displays the status of...

Page 92: ...OS Interface Version ME Version iSCSI Configuration This item displays iSCSI configuration information iSCSI Initiator Name This item displays the name of the iSCSI Initiator which is a unique name us...

Page 93: ...ows the user to specify the duration for LEDs to blink The range is from 0 15 seconds The default setting is 0 PORT CONFIGURATION INFORMATION This section displays the following port information UEFI...

Page 94: ...SMBIOS System Management BIOS Event Logging during system boot The options are Enabled and Disabled Runtime Error Logging Support Select Enabled to support Runtime Error Logging The options are Enabl...

Page 95: ...m boot events The options are Disabled and Enabled MECI Multiple Event Count Increment Enter the increment value for the multiple event counter Enter a number from 1 to 255 The default setting is 1 ME...

Page 96: ...firmware installed in your system System Event Log Enabling Disabling Options SEL Components Select Enabled for all system event logging at bootup The options are Enabled and Disabled Erasing Setting...

Page 97: ...he system is rebooted The options are No and Yes Configuration Address Source This feature allows the user to select the source of the IP address for this computer If Static is selected you will need...

Page 98: ...for the system Boot Option Priorities Boot Option 1 Boot Option 2 Boot Option 3 etc Use this feature to specify the sequence of boot device priority Hard Disk Drives Network Devices Use these options...

Page 99: ...entry is required Select Setup to require the password only when entering setup Select Always to require the pass word when entering setup and on each boot The options are Setup and Always Administrat...

Page 100: ...Changes and Reset When you have completed the system configuration changes select this option to save the changes and reboot the computer so that the new system configuration settings can take effect...

Page 101: ...this feature and press Enter to save the current settings as the user s defaults When the dialog box appears asking you if you want to save values as user s defaults select Yes to save the current va...

Page 102: ...7 34 SUPERSERVER 6027R 72RFT User s Manual Notes...

Page 103: ...ossible repairs These fatal errors are usually communicated through a series of audible beeps The numbers on the fatal error list on the following page correspond to the number of beeps for the corres...

Page 104: ...A 2 SUPERSERVER 6027R 72RFT User s Manual Notes...

Page 105: ...r DIMM sockets supporting up to 768 GB RDIMM ECC LRDIMM or ECC non ECC UDIMM DDR3 1600 1333 1066 800 type memory Note see Section 5 6 for details Drive Bays Eight hot swap drive bays to house eight SA...

Page 106: ...ndensing Non operating Relative Humidity 5 to 95 non condensing Regulatory Compliance Electromagnetic Emissions FCC Class A EN 55022 Class A EN 61000 3 2 3 3 CISPR 22 Class A Electromagnetic Immunity...

Page 107: ...B 1 Appendix B System Specifications Notes...

Page 108: ...erform be reasonably expected to result in significant injury or loss of life or catastrophic property damage Accordingly Supermicro dis claims any and all liability and should buyer use or sell such...

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