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Mag-Bind® Total Pure NGS - 384-well Plate Protocol

Mag-Bind

®

 Total Pure NGS Protocol for 384-well Plates

Materials and Equipment to be Supplied by User:

• 

384-well PCR plate containing PCR samples (up to 100 μL/well)

• 

Magnetic separation device for 384-well PCR plates

• 

Skirted 384-well PCR plate

• 

Vortexer

• 

Multichannel pipettor

• 

Multichannel disposable reservoirs

• 

Sealing film

• 

70% ethanol

• 

Elution Buffer (Cat#PDR048 or 10 mM Tris pH 8.0),TE Buffer, or nuclease-free water

Before Starting:

• 

Bring the Mag-Bind® Total Pure NGS to room temperature before use.

1.  Read the manufacturer’s instruction manual for the magnetic separation device, if 

provided. 

2.  Place the 384-well PCR plate on the bench and measure the volume of the PCR 

reaction. Transfer the sample to a skirted 384-well PCR plate. 

3.  Shake the Mag-Bind® Total Pure NGS to resuspend any Mag-Bind® Total Pure NGS 

particles that may have settled. Allow Mag-Bind® Total Pure NGS to come to room 
temperature before use.

4.  Add the desired volume  of  Mag-Bind® Total Pure NGS to each well based upon 

size of fragments to recover.  Adding more Mag-Bind Total Pure NGS allows smaller 
fragments to bind to magnetic beads while the larger fragments will continue to 
bind.  Volume to add to the sample is normaly determined by the next generation 
sequencing library construction instruction manual.

Example:

 1.2X ratio required: 50 µL sample x 1.2 = add 60 µL Mag-Bind® Total Pure 

NGS

Summary of Contents for Mag-Bind M1378-00

Page 1: ...Mag Bind Total Pure NGS M1378 00 5 mL M1378 01 50 mL M1378 02 500 mL August 2016...

Page 2: ...ions 4 Storage and Stability 4 Mag Bind TotalPureNGS96 wellPlateProtocol 5 Mag Bind TotalPureNGS 384 wellPlateProtocol 8 Troubleshooting Guide 11 Ordering Information 12 Manual Revision August 2016 In...

Page 3: ...solution for nucleic acid purification compared to centrifugation and vacuum based technologies The product can be easily scaled up while providing very user friendly handling procedures If using Mag...

Page 4: ...3 Illustrated Protocol Determine the Reaction size Add Mag Bind Total Pure NGS and Mix Magnetize and Remove Supernatant Wash Twice with 70 Ethanol Dry Elute DNA...

Page 5: ...e and Stability Mag Bind Total Pure NGS is guaranteed for at least 12 months from the date of purchase when stored at 2 8 C Kit Contents Product Number M1378 00 M1378 01 M1378 02 Mag Bind Total Pure N...

Page 6: ...d 2 Place the 96 well PCR plate on the bench and measure the volume of the PCR reaction Determine the volume of Mag Bind Total Pure NGS that will be added to the reaction If the reaction volume will e...

Page 7: ...d the Mag Bind Total Pure NGS 11 Aspirate and discard the cleared supernatant Do not disturb the Mag Bind Total Pure NGS 12 Repeat Steps 9 11 for a second 70 ethanol wash step 13 Leave the plate on th...

Page 8: ...re until the Mag Bind Total Pure NGS is completely cleared from solution 19 Transfer the cleared supernatant containing purified DNA to a new 96 well microplate and seal with non permeable sealing fil...

Page 9: ...etic separation device if provided 2 Place the 384 well PCR plate on the bench and measure the volume of the PCR reaction Transfer the sample to a skirted 384 well PCR plate 3 Shake the Mag Bind Total...

Page 10: ...al Pure NGS 11 Aspirate and discard the cleared supernatant Do not disturb the Mag Bind Total Pure NGS 12 Repeat Steps 9 11 for a second 70 ethanol wash step 13 Leave the plate on the magnetic separat...

Page 11: ...ure until the Mag Bind Total Pure NGS is completely cleared from solution 19 Transfer the cleared supernatant containing purified DNA to a new 384 well microplate and seal with non permeable sealing f...

Page 12: ...me Aspirate slowly DNA remains bound to beads Increase elution volume Incomplete resuspension of the beads during elution Vortex or pipet up and down to fully resuspend the beads Problem Cause Solutio...

Page 13: ...832 8896 Product Part Number Mag Bind Total Pure NGS 50 mL M1378 01 Mag Bind Total Pure NGS 500 mL M1378 02 Elution Buffer 100 mL PDR048 HiBind E Z N A Mag Bind and MicroElute are registered trademark...

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