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Chapter 5: Advanced Serverboard Setup

5-27

Note: SD III Software Revision 1.0 can be downloaded from our Web Site at: ftp://
ftp.supermicro.com/utility/Supero_Doctor_III/. You can also download the SDIII
User's Guide at: http://www.supermicro.com/manuals/other/SDIII_User_Guide.pdf.
For Linux, we will recommend using Supero Doctor II.

Supero Doctor III Interface Display Screen (Remote Control)

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Содержание SUPERSERVER 1027GR-TRF

Страница 1: ...Relion 1800GT Technical Guide Rev 1 0 PENGUIN COMPUTING www penguincomputing com 1 888 PENGUIN 736 4846 twitter PenguinHPC Versatile Enterprise and HPC Server featuring the latest Intel Technology...

Страница 2: ...SUPER SUPERSERVER 1027GR TRF 1027GR TRFT USER S MANUAL Revision 1 0a...

Страница 3: ...any such disputes Super Micro s total liability for all claims will not exceed the price paid for the hardware product FCC Statement This equipment has been tested and found to comply with the limits...

Страница 4: ...the server system and describes the main features of the Super X9DRG HF X9DRG HTF serverboard and the SC118GQ R1800B chassis Chapter 2 Server Installation This chapter describes the steps necessary t...

Страница 5: ...ng the serverboard Chapter 6 Advanced Chassis Setup Refer to Chapter 6 for detailed information on the SC118GQ R1800B 1U rackmount server chassis You should follow the procedures given in this chapter...

Страница 6: ...v Preface Notes...

Страница 7: ...e System 2 1 2 3 Preparing for Setup 2 1 Choosing a Setup Location 2 1 Rack Precautions 2 2 Server Precautions 2 2 Rack Mounting Considerations 2 3 Ambient Operating Temperature 2 3 Reduced Airflow 2...

Страница 8: ...d Serverboard Setup 5 1 Handling the Serverboard 5 1 Precautions 5 1 Unpacking 5 2 5 2 Serverboard Installation 5 2 5 3 Connecting Cables 5 3 Connecting Data Cables 5 3 Connecting Power Cables 5 3 Con...

Страница 9: ...Bay Installation Removal 6 7 Accessing the Drive Bays 6 7 Hard Drive Installation 6 7 6 5 Power Supply 6 8 Chapter 7 BIOS 7 1 Introduction 7 1 Starting BIOS Setup Utility 7 1 How To Change the Configu...

Страница 10: ...CP 240 00117 0N Two passive CPU heatsinks one each of SNK P0047PS and SNK P0047PSC Riser Cards One RSC R1UG E16A X9 for PCI Express 3 0 x16 card left front side One RSC R1UG E16B X9 for PCI Express 3...

Страница 11: ...details Serial ATA A SATA controller is integrated into the chipset to provide a 4 port SATA subsystem which is RAID 0 1 5 and 10 supported Two of these are SATA 3 0 ports and two are SATA 2 0 ports...

Страница 12: ...Q R1800B chassis includes four 2 5 drive bays which may be used to house hot swappable SATA drives RAID 0 1 5 and 10 are supported Front Control Panel The control panel provides a system monitoring an...

Страница 13: ...s which place this system at the forefront of today s GPU computing solutions Please refer to the NVIDIA web site www nvidia com for details on Fermi GPUs Notes The GPUs can be bundled with the system...

Страница 14: ...3 4 SPI VGA Port Dedicated LAN DMI2 BMC WPCM450 PCI E X16 PCI E X16 G3 PCI USB 2 0 SATA2 SAS1 E5 2600 Series 8 SNB CORE DDR3 8 SNB CORE DDR3 DMI2 DMI2 2 3 1 1 2 3 QPI 8G 4GB s PCI E X16 VGA PCI E X8 G...

Страница 15: ...pe Address Super Micro Computer B V Het Sterrenbeeld 28 5215 ML s Hertogenbosch The Netherlands Tel 31 0 73 6400390 Fax 31 0 73 6416525 Email sales supermicro nl General Information support supermicro...

Страница 16: ...r It should be situated in a clean dust free area that is well ventilated Avoid areas where heat electrical noise and electromagnetic fields are generated You will also need it placed near a grounded...

Страница 17: ...is stable before extending a component from the rack You should extend only one component at a time extending two or more si multaneously may cause the rack to become unstable Rack mounted equipment...

Страница 18: ...hat the amount of airflow required for safe operation is not compromised Mechanical Loading Equipment should be mounted into a rack so that a hazardous condition does not arise due to uneven mechanica...

Страница 19: ...g Note This rail will fit a rack between 26 and 33 5 deep Identifying the Sections of the Rack Rails The chassis package includes two rack rail assemblies in the rack mounting kit Each assembly consis...

Страница 20: ...a server rack Attaching the inner rail extensions to to the inner rails stabilizes the chassis within the rack Installing the Inner Rail Extensions 1 Place the inner rail extensions B over the preatt...

Страница 21: ...mounting on to the rack Assembling the Outer Rails 1 Identify the left and right outer rails by examining the ends which bend outward 2 Slide the front section of the outer rail A into the rear sectio...

Страница 22: ...o the proper length so that the outer rail fits snugly within the rack 2 Align the holes on the front of the outer rail with the holes on the front of the rack C and secure with the screws provided 3...

Страница 23: ...into the front of the outer rails 2 Push the chassis backward into the rack until it clicks into the locked postion Removing the Chassis From a Rack 1 Press the outer rail latch to release the chassi...

Страница 24: ...r follow the server will extend out the front of the rack Larger chassis should be positioned to balance the weight between front and back If a bezel is included on your server remove it Then at tach...

Страница 25: ...2 10 SUPERSERVER 1027GR TRF 1027GR TRFT User s Manual Notes...

Страница 26: ...ntrol panel as well as others on the drive carri ers to keep you constantly informed of the overall status of the system as well as the activity and health of specific components There are also two bu...

Страница 27: ...continuously on not flash ing it indicates an overheat condition which may be caused by cables obstructing the airflow in the system or the ambient room temperature being too warm Check the routing o...

Страница 28: ...ing accessed Please refer to Chapter 6 for instructions on replacing failed SATA drives Red The red LED to indicate a SATA drive failure If one of the SATA drives fail you should be notified by your s...

Страница 29: ...3 4 SUPERSERVER 1027GR TRF 1027GR TRFT User s Manual Notes...

Страница 30: ...e operating system first and then unplug the power cords of all the power supply units in the system When working around exposed electrical circuits another person who is familiar with the power off c...

Страница 31: ...s product may be connected to an IT power system In all cases make sure that the unit is also reliably connected to Earth ground Serverboard Battery CAUTION There is a danger of explosion if the onboa...

Страница 32: ...PCBs come into contact with your clothing which may retain a charge even if you are wearing a wrist strap Handle a board by its edges only do not touch its components peripheral chips memory modules o...

Страница 33: ...this practice is not strictly followed Figure 4 1 Installing the Onboard Battery T UM TTER TTER O ER Please handle used batteries carefully Do not damage the battery in any way a damaged battery may...

Страница 34: ...tant to handle them very carefully see previous chapter To prevent the serverboard from bending keep one hand under the center of the board to support it when handling The following measures are gener...

Страница 35: ...then pull the cover off 2 Make sure that the I O ports on the serverboard align properly with their respective holes in the I O shield at the back of the chassis 3 Carefully mount the serverboard to...

Страница 36: ...for connector locations SATA drive data cables I SATA0 3 SATA sideband cable T SGPIO 1 Control Panel cable JF1 GPU power cables JPW3 JPW7 and JPW11 SATA backplane power cable JPW5 Important Make sure...

Страница 37: ...in conformance with the PC 99 specification See Figure 5 2 below for the colors and locations of the various I O ports Figure 5 1 Control Panel Header Pins Figure 5 2 I O Ports NMI x Key 3 3V FP UID...

Страница 38: ...e to install the serverboard into the chassis before you install the CPU heatsinks When receiving a serverboard without a processor pre installed make sure that the plastic CPU socket cap is in place...

Страница 39: ...the WARNING plastic cap from the socket 5 Use your thumb and index finger to hold the CPU by its edges Align the CPU keys which are semi circle cutouts against the socket keys 6 Once they are aligned...

Страница 40: ...make sure that they are flush with the socket 8 Close the load plate Lock the lever labeled Close 1st then lock the lever labeled Open 1st Use your thumb to gently push the load levers down until the...

Страница 41: ...two remaining screws then finish the installation by fully tightening all four screws Installing a CPU Heatsink Removing the Heatsink 1 Unscrew and remove the heatsink screws from the serverboard in t...

Страница 42: ...le vertically into its slot Pay attention to the notch along the bottom of the module to avoid installing incorrectly see Figure 5 4 3 Gently press down on the DIMM module until it snaps into place in...

Страница 43: ...s in pairs 1 CPU 2 DIMMs CPU1 P1 A1 P1 B1 1 CPU 4 DIMMs CPU1 P1 A1 P1 B1 P1 C1 P1 D1 2 CPUs 4 DIMMs CPU1 CPU2 P1 A1 P1 B1 P2 E1 P2 F1 2 CPUs 6 DIMMs CPU1 CPU2 P1 A1 P1 B1 P1 C1 P1 D1 P2 E1 P2 F1 2 CPU...

Страница 44: ...to offering support for three GPU cards the 1027GR TRF 1027GR TRFT supports one low profile PCI Express 3 0 x8 expansion card in x16 slot A riser card is required to support expansion cards Refer to...

Страница 45: ...I SATA0 S SATA0 S SATA1 S SATA2 S SATA3 DM1 LE1 DM2 JPL1 JWD1 J30 JPB1 J29 JPBR1 JPME1 JWP1 JPG1 FAN2 FAN1 FANF FAND FANH FANC FANG FANE FAN4 FAN3 FANA FANB T SGPIO5 T SGPIO1T SGPIO2 I SATA3 I SATA4...

Страница 46: ...Battery Onboard Battery FAN1 FAN4 CPU Fans FANA FANH GPU Fans JCOM1 COM Header for Front Chassis Access JF1 Control Panel Header JL1 Chassis Intrusion Header JOH1 Overheat LED Indicator JI2 C1 JI2 C2...

Страница 47: ...when CPU2 is populated SW1 UID Switch T SGPIO 1 2 S Serial Link General Purpose I O Headers USB 0 1 Back Panel USB Ports LED Description State Status DM1 BMC Heartbeat LED Green BMC Normal LE1 Standby...

Страница 48: ...finition 1 Power Button 2 Ground Power Connectors Three SMC proprietary power connectors are located at JPW1 JPW2 and JPW9 to provide main power to the serverboard Seven 12V 8 pin power connectors lo...

Страница 49: ...failure The blue LED pin 7 works as the UID LED indicator for the front panel UID button located on pins 13 14 of JF1 When Jumper J_UID_OW is set to off default the red LED takes precedence over the b...

Страница 50: ...m See the table on the right for pin definitions Power LED Pin Definitions JF1 Pin Definition 15 3 3V 16 Control HDD UID LED Pin Definitions JF1 Pin Definition 13 UID Signal 3 3V 14 HDD Activity Fan H...

Страница 51: ...e Input Output headers are provided on the serverboard These headers sup port serial link interfaces for the onboard SATA ports See the table on the right for pin definitions T SGPIO Pin Definitions P...

Страница 52: ...are located on the I O backplane Connect USB devices to these ports Ethernet Ports Two Ethernet ports are located next to the USB 0 1 on the IO backplane In addition an IPMI Dedicated LAN is located...

Страница 53: ...posted on our Website UID Switch Pin Definition 1 Button In 2 Ground 3 Ground 4 Ground UID LED LE4 Status Color State OS Status Blue On Windows OS Unit Identified Blue Blinking Linux OS Unit Identifi...

Страница 54: ...2 1 CMOS Clear JBT1 is used to clear CMOS which will also clear any passwords Instead of pins this jumper consists of contact pads to prevent accidentally clearing the contents of CMOS To clear CMOS...

Страница 55: ...mper settings Watch Dog must also be enabled in BIOS Note When enabled the user needs to write their own application software in order to disable the Watch Dog Timer Watch Dog Jumper Settings Jumper S...

Страница 56: ...cted Green System On Green Flashing Quickly ACPI S1 State BMC Enable Disable Jumper Settings Both Jumpers Definition Pins 1 2 Enabled Pins 2 3 Disabled BMC Enable Disable Use jumper JPB1 to enable or...

Страница 57: ...ht for more information BMC Heatbeat LED Indicator LED Status Green Blinking BMC Normal Rear UID LED The rear UID LED is located at LE4 on the backplane This LED is used in conjunc tion with the rear...

Страница 58: ...aged with your system Driver Tool Installation Display Screen Note Click the icons showing a hand writing on paper to view the readme files for each item Click the computer icons to the right of these...

Страница 59: ...ys crucial system information such as CPU temperature system voltages and fan status See the Figure below for a display of the Supero Doctor III interface Note The default User Name and Password for S...

Страница 60: ...ded from our Web Site at ftp ftp supermicro com utility Supero_Doctor_III You can also download the SDIII User s Guide at http www supermicro com manuals other SDIII_User_Guide pdf For Linux we will r...

Страница 61: ...5 28 SUPERSERVER 1027GR TRF 1027GR TRFT User s Manual Notes...

Страница 62: ...t damage to any printed circuit boards PCBs it is important to handle them very carefully The following measures are generally sufficient to protect your equipment from ESD damage Precautions Use a gr...

Страница 63: ...See Chapter 3 System In terface for details on the LEDs and the control panel buttons Details on JF1 can be found in Chapter 5 Advanced Serverboard Installation 6 3 System Cooling Ten 4 cm counter ro...

Страница 64: ...e the position of the failed fan Never run the server for an extended period of time with the top cover open 2 Turn off the power to the system and unplug the AC power cord 3 Remove the failed fan s w...

Страница 65: ...the Air Shroud Installing the Air Shroud Air shrouds concentrate airflow to maximize fan efficiency The SC118GQ chassis air shroud does not require screws to set up Note that each GPU card has its ow...

Страница 66: ...ets Kepler cards require a different bracket than Fermi cards MCP 240 00117 0N The system comes with Fermi brackets al ready installed by default If replacing Fermi GPUs with Kepler GPUs remove the Fe...

Страница 67: ...ards 1 2 Airflow Important Note for Kepler GPUs note the airflow arrows on top of the GPU card The card with the arrow pointing toward the Tesla logo should go on the left side of the chassis and the...

Страница 68: ...andle 2 Use the handle to pull the drive carrier out of the chassis Installing a Hard Drive into a Drive Carrier 1 Remove the dummy drive which comes pre installed in the drive carrier by removing the...

Страница 69: ...n 1800 watt redundant power supply consisting of two power modules Each power supply module has an auto switching capability which enables it to automatically sense and operate at a 100V 240V input vo...

Страница 70: ...ule 3 Use the handle to pull it straight out with the rounded handle Installing a New Power Supply 1 Replace the failed hot swap unit with another identical power supply unit 2 Push the new power supp...

Страница 71: ...6 10 SUPERSERVER 1027GR TRF 1027GR TRFT Series User s Manual Notes...

Страница 72: ...plays all the options that can be configured Grayed out options cannot be configured Options in blue can be configured by the user The right frame displays the key legend Above the key legend is an ar...

Страница 73: ...utility From the main menu you can access the other setup screens An AMI BIOS identification string is displayed at the left bottom corner of the screen below the copyright message Warning Do not upg...

Страница 74: ...Tab key to move between fields The date must be entered in Day MM DD YY format The time is entered in HH MM SS format Note The time is in the 24 hour format For example 5 30 P M appears as 17 30 00 S...

Страница 75: ...ormal POST messages The op tions are Enabled and Disabled AddOn ROM Display Mode Use this item to set the display mode for the Option ROM Select Keep Current to use the current AddOn ROM Display setti...

Страница 76: ...the system will power off immediately as soon as the user presses the power button If this feature is set to 4 Seconds Override the system will power off when the user presses the power button for 4...

Страница 77: ...ket 1 or Socket 2 supports 64 bit technology Clock Spread Spectrum Select Enable to enable Clock Spectrum support which will allow the BIOS to moni tor and attempt to reduce the level of Electromagnet...

Страница 78: ...o use the Intel Advanced Encryption Standard AES New Instruc tions NI to ensure data security The options are Enabled and Disabled MLC Streamer Prefetcher Available when supported by the CPU If set to...

Страница 79: ...d Energy Efficient and Custom If the option is set to Custom the following items will display EIST Available when Power Technology is set to Custom EIST Enhanced Intel SpeedStep Technology allows the...

Страница 80: ...nce Bias This setting allows the user to adjust the fan speed based on performance maxi mum cooling or energy efficiency maximum energy savings The options are Performance Balanced Performance Balance...

Страница 81: ...g and data sharing The options are Enabled and Disabled Data Direct I O Select Enabled to enable Intel I OAT I O Acceleration Technology which sig nificantly reduces CPU overhead by leveraging CPU arc...

Страница 82: ...for the slot specified above The options are Gen1 Generation 1 Gen2 and Gen3 CPU2 Slot 4 PCI E 3 0 x16 OPROM This feature allows the user to set the PCI Exp bus speed for the slot specified above The...

Страница 83: ...ry modules detected by the BIOS will be displayed as detected by the BIOS Memory Mode When Independent is selected all DIMMs are available to the operating system When Mirroring is selected the mother...

Страница 84: ...day The options are Enabled and Disabled Demand Scrub Demand Scrubbing is a process that allows the CPU to correct correctable memory errors found on a memory module When the CPU or I O issues a deman...

Страница 85: ...when USB Functions is not Disabled Select Enabled to support legacy USB devices Select Auto to disable legacy sup port if USB devices are not present Select Disable to have USB devices available for E...

Страница 86: ...e is selected Aggressive Link Power Management Select Enabled to enable Aggressive Link Power Management support for Cougar Point B0 stepping and beyond The options are Enabled and Disabled Port 0 5 H...

Страница 87: ...gacy ROM PCI Latency Timer Use this feature to set the latency Timer of each PCI device installed on a PCI bus Select 64 to set the PCI latency to 64 PCI clock cycles The options are 32 64 96 128 160...

Страница 88: ...OPROM Select Enabled to enable Option ROM support to boot the computer using a network interface from the slots specified above The options are Enabled and Disabled Onboard LAN Option ROM Select Selec...

Страница 89: ...he AMI BIOS to automatically select the best PECI setting Device Mode Use this feature to select the desired mode for a serial port specified The options are Normal and High Speed XSOL Configuration S...

Страница 90: ...e Redirection Select VT100 to use the ASCII Character set Select VT100 to add color and function key support Select ANSI to use the Extended ASCII Char acter Set Select VT UTF8 to use UTF8 encoding to...

Страница 91: ...mpty The options are None and Hardware RTS CTS VT UTF8 Combo Key Support Select Enabled to enable VT UTF8 Combination Key support for ANSI VT100 terminals The options are Enabled and Disabled Recorder...

Страница 92: ...ect VT UTF8 to use UTF8 encoding to map Unicode characters into one or more bytes The options are ANSI VT100 VT100 and VT UTF8 Bits Per Second This item sets the transmission speed for a serial port u...

Страница 93: ...ck RTC does in synchronizing multimedia streams providing smooth playback reducing the de pendency on other timestamp calculation devices such as an x86 RDTSC Instruc tion embedded in the CPU The High...

Страница 94: ...eature Intel TXT LT SX Configuration This feature displays the following TXT configuration setting TXT LT SX Support This item indicates if the Intel TXT support is enabled or disabled Intel TXT LT SX...

Страница 95: ...Exit Intel I350 Gigabit Network Connections These items display the following information on the Intel I350 LAN connections XNIC Configuration Link Speed Use this feature to change the link speed and...

Страница 96: ...gs Select the Event Logs tab to access the following submenu items XChange SMBIOS Event Log Settings This feature allows the user to configure SMBIOS Event settings Enabling Disabling Options SMBIOS E...

Страница 97: ...IOS error event logs that ex ceed the limit when the SMBIOS event log is full Select Do Nothing for the system to do nothing when the SMBIOS event log is full The options are Do Nothing and Erase Imme...

Страница 98: ...ect the IPMI Intelligent Platform Management Interface tab to access the fol lowing submenu items IPMI Firmware Revision This item indicates the IPMI firmware revision used in your system IPMI Status...

Страница 99: ...Network Configuration LAN Channel 1 This feature allows the user to configure the settings for LAN1 Port Update IPMI LAN Configuration This feature allows the user to decide if the BIOS should config...

Страница 100: ...teway IP Address This item displays the Gateway IP address for this computer This should be in decimal and in dotted quad form i e 192 168 10 253 7 6 Boot This submenu allows the user to configure the...

Страница 101: ...to configure the following security settings for the system Administrator Password Use this feature to set the Administrator Password which is required to enter the BIOS setup utility The length of t...

Страница 102: ...Reset When you have completed the system configuration changes select this option to save the changes and reboot the computer so that the new system configuration settings can take effect Select Save...

Страница 103: ...lts Save as User Defaults Select this feature and press Enter to save the current settings as the user s defaults When the dialog box appears asking you if you want to save values as user s defaults c...

Страница 104: ...ors will not allow the system to continue the boot up procedure If a fatal error occurs you should consult with your system manufacturer for possible repairs BIOS POST Error Codes Beep Code Error Mess...

Страница 105: ...A 2 SUPERSERVER 1027GR TRF 1027GR TRFT User s Manual Notes...

Страница 106: ...emory section in Chapter 5 for details GPUs Graphics Processing Units A total of three GPUs are supported true PCI E 3 0 x16 signal SATA Controller Intel on chip controller for 10 SATA ports RAID 0 1...

Страница 107: ...C 40 to 140 F Operating Relative Humidity 8 to 90 non condensing Non Operating Relative Humidity 5 to 95 non condensing Regulatory Compliance Electromagnetic Emissions FCC Class A EN 55022 Class A EN...

Страница 108: ...orm be reasonably expected to result in significant injury or loss of life or catastrophic property damage Accordingly Supermicro dis claims any and all liability and should buyer use or sell such pro...

Страница 109: ...B 4 SUPERSERVER 1027GR TRF 1027GR TRFT Series User s Manual Notes...

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