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Chapter 5: Advanced Serverboard Setup

5-7

Installing a Passive CPU Heatsink

1. Do not apply any thermal grease to the heatsink or the CPU die -- the re-

quired amount has already been applied.

2. Place the heatsink on top of the CPU so that the four mounting holes are

aligned with those on the Serverboard's and the Heatsink Bracket underneath.

3. Screw in two diagonal screws (i.e., the #1 and the #2 screws) until just snug

(-do not over-tighten the screws to avoid possible damage to the CPU.)

4. Finish the installation by fully tightening all four screws.

Motherboard

Screw#1

Screw#2

Mounting Holes

Screw#3

Screw#4

Содержание 6047R-E1R36L

Страница 1: ...SUPER STORAGE SYSTEM 6047R E1R36L SUPER USER S MANUAL 1 0...

Страница 2: ...any such disputes Super Micro s total liability for all claims will not exceed the price paid for the hardware product FCC Statement This equipment has been tested and found to comply with the limits...

Страница 3: ...D JBOD serverboard and the SC847E16 R1K28LPB chassis Chapter 2 Server Installation This chapter describes the steps necessary to install the 6047R E1R36L into a rack and check out the server configura...

Страница 4: ...configuring the serverboard Chapter 6 Advanced Chassis Setup Refer to Chapter 6 for detailed information on the SC847E16 R1K28LPB chassis You should follow the procedures given in this chapter when in...

Страница 5: ...Notes Preface v...

Страница 6: ...e System 2 1 2 3 Preparing for Setup 2 1 Choosing a Setup Location 2 1 Rack Precautions 2 2 Server Precautions 2 2 Rack Mounting Considerations 2 3 Ambient Operating Temperature 2 3 Reduced Airflow 2...

Страница 7: ...rd 5 1 Precautions 5 1 Unpacking 5 2 5 2 Connecting Cables 5 2 Connecting Data Cables 5 2 Connecting Power Cables 5 2 Connecting the Control Panel 5 2 5 3 Rear I O Ports 5 3 5 4 Installing the Process...

Страница 8: ...6 6 Hard Drive Backplane 6 7 Removing the Air Shroud 6 8 6 6 Installing Optional Fixed Hard Drives 6 9 6 7 Power Supply 6 10 Power Supply Failure 6 10 6 7 Attaching a JBOD Expansion Chassis 6 11 Chap...

Страница 9: ...icro com In addition to the serverboard and chassis various hardware components have been included with the 6047R E1R36L as listed below Two passive CPU heatsinks SNK P0048P Three 8 cm system fans FAN...

Страница 10: ...DIMM or up to 128 GB of ECC non ECC DDR3 Unbuffered memory UDIMM See Chapter 5 for details SAS A SAS 2 0 controller is integrated into the serverboard providing 8x lanes of 6Gb s SAS with basic HBA IT...

Страница 11: ...24 on the front of the chassis and 12 located on the rear of the chassis which are hot swappable units Front Control Panel The control panel on the SuperServer 6047R E1R36L provides you with system m...

Страница 12: ...3 0 x8 PCIE 3 0 x4 SAS LSI LAN1 LAN2 RJ45 RJ45 LAN3 LAN4 VGA CONN IPMI LAN PHY RTL8201F RJ45 RJ45 SAS2308 Powerville I350 AM4 Quad GLAN J26 SLOT 6 L SAS0 3 L SAS4 7 J21 SLOT 1 PCIE 3 0 x8 DDR3 DIMM H...

Страница 13: ...D3 LEDM1 LED2 LAN2 4 LAN1 3 CPU1 CPU2 CPU2 CPU1 CPU2 CPU1 PWR I2C UID P2 DIMME1 P2 DIMMF2 P2 DIMMF1 P2 DIMMG2 P2 DIMMG1 P2 DIMMH2 P2 DIMMH1 P1 DIMMA2 P1 DIMMA1 P1 DIMMB2 P1 DIMMB1 P1 DIMMC1 P1 DIMMC2...

Страница 14: ...Address Super Micro Computer B V Het Sterrenbeeld 28 5215 ML s Hertogenbosch The Netherlands Tel 31 0 73 6400390 Fax 31 0 73 6416525 Email sales supermicro nl General Information support supermicro n...

Страница 15: ...Server 6047R E1R36L It should be situated in a clean dust free area that is well ventilated Avoid areas where heat electrical noise and electromagnetic fields are generated You will also need it place...

Страница 16: ...omponent from the rack You should extend only one component at a time extending two or more si multaneously may cause the rack to become unstable Server Precautions Review the electrical and general s...

Страница 17: ...omised Mechanical Loading Equipment should be mounted into a rack so that a hazardous condition does not arise due to uneven mechanical loading Circuit Overloading Consideration should be given to the...

Страница 18: ...sembly procedure will differ slightly You should also refer to the installation instructions that came with the rack unit you are using Note This rail will fit a rack between 27 and 34 45 deep Identif...

Страница 19: ...ls on the side of the chassis aligning the hooks of the chas sis with the inner rail holes Make sure that the rail faces outward so that it will fit with the rack s mounting bracket 2 Slide the rail t...

Страница 20: ...me direction 2 Adjust both the short and long brackets to the proper distance so that the rail fits snugly into the rack 3 Secure the long bracket to the front side of the outer rail with two M5 screw...

Страница 21: ...Chapter 2 Server Installation 2 7 Figure 2 4 Installing the Outer Rails to the Server Rack 1 3 1 3 1 2...

Страница 22: ...assis rails A with the front of the rack rails B 3 Slide the chassis rails into the rack rails keeping the pressure even on both sides you may have to depress the locking tabs when inserting When the...

Страница 23: ...t button and a power on off button Reset Use the reset button to reboot the system Power This is the main power button which is used to apply or turn off the main system power Turning off system power...

Страница 24: ...re When on continuously it indicates an overheat condition which may be caused by cables obstructing the airflow in the system or the ambient room temperature being too warm Check the routing of the c...

Страница 25: ...ing 3 4 Drive Carrier LEDs Each drive carrier has two LEDs Green When illuminated the green LED on the front of the drive carrier indi cates drive activity A connection to the backplane enables this L...

Страница 26: ...3 4 SUPERSTORAGESYSTEM 6047R E1R36L User s Manual Notes...

Страница 27: ...power you should first power down the system with the operating system first and then unplug the power cords of all the power supply units in the system When working around exposed electrical circuits...

Страница 28: ...your body which are excellent metal conductors that can create short circuits and harm you if they come into contact with printed circuit boards or areas where power is present Serverboard Battery CAU...

Страница 29: ...use Touch a grounded metal object before removing the board from the antistatic bag Do not let components or PCBs come into contact with your clothing which may retain a charge even if you are wearing...

Страница 30: ...his practice is not strictly followed Figure 4 1 Installing the Onboard Battery L T UM ATTERY ATTERY OL ER Please handle used batteries carefully Do not damage the battery in any way a damaged battery...

Страница 31: ...ully see previous chapter To prevent the serverboard from bending keep one hand under the center of the board to support it when handling The following measures are generally sufficient to protect you...

Страница 32: ...ir locations noted should be connected See the layout on page 5 10 for connector locations Control Panel cable JF1 USB cable for front side access USB4 5 Important Make sure the the cables do not come...

Страница 33: ...I O Ports NMI x Key 3 3V ID UID SW 3 3V Stby NIC1 Activity LED NIC2 Activity LED Red Blue Cathode 3 3V Reset Button Power Button Ground x Key Power On LED HDD LED NIC1 Link LED NIC2 Link LED OH Fan F...

Страница 34: ...ing any hardware components Make sure that you install the processor into the CPU socket before you install the CPU heatsink If you buy a CPU separately make sure that you use an Intel certified multi...

Страница 35: ...ARNING plastic cap from the socket 5 Use your thumb and index finger to hold the CPU by its edges Align the CPU keys which are semi circle cutouts against the socket keys 6 Once they are aligned caref...

Страница 36: ...te again and double check that the CPU is aligned properly 7 With the CPU in the socket in spect the four corners of the CPU to make sure that they are flush with the socket 8 Close the load plate Loc...

Страница 37: ...eatsink on top of the CPU so that the four mounting holes are aligned with those on the Serverboard s and the Heatsink Bracket underneath 3 Screw in two diagonal screws i e the 1 and the 2 screws unti...

Страница 38: ...erverboard in the sequence as shown in the illustration below 2 Gently wriggle the heatsink to loosen it from the CPU Do not use excessive force when wriggling the heatsink 3 Once the heatsink is loos...

Страница 39: ...attention to the notch along the bottom of the module to avoid installing incorrectly see Figure 5 3 3 Use your thumbs to gently press down on both ends of the DIMM module until it snaps into place in...

Страница 40: ...MMG1 P2 DIMMH1 2 CPUs 10 16 DIMMs CPU1 CPU2 P1 DIMMA1 P1 DIMMB1 P1 DIMMC1 P1 DIMMD1 P2 DIMME1 P2 DIMMF1 P2 DIMMG1 P2 DIMMH1 Any memory pairs in P1 P2 DIMM slots 2 CPUs 16 DIMMs CPU1 CPU2 P1 DIMMA1 P1...

Страница 41: ...detailed information on memory support and updates please refer to the SMC Recommended Memory List posted on our website at http www supermicro com support resources mem cfm Intel E5 2600 Series Proc...

Страница 42: ...5 12 SUPERSTORAGESYSTEM 6047R E1R36L User s Manual 1 CPU 2 DIMMs 1 CPU 5 8 DIMMs 1 CPU 4 DIMMs Populate blue DIMM slots first then the rest in any order...

Страница 43: ...nced Serverboard Setup 5 13 2 CPU 6 DIMMs 2 CPU 8 DIMMs 2 CPU 10 16 DIMMs For two CPUs and 16 DIMMs populate all DIMM slots Populate blue DIMM slots first then any memory pairs in the remaining slots...

Страница 44: ...by removing the shield for the PCI slot you wish to populate 2 Fully seat the card into the slot pushing down with your thumbs evenly on both sides of the card 3 Finish by using a screw to secure the...

Страница 45: ...RM_I2C2 JVR1 FAN5 FAN6 FAN8 FAN7 FAN1 FAN2 FAN3 FAN4 JF2 T SGPIO1 T SGPIO2 JUSB6 JSD1 JBT1 JBAT1 JTPM1 JF1 JPI2C1 JOH1 JI2C2 JL1 JSTBY1 JUIDB J4 JD1 LED3 LEDM1 LED2 LAN2 4 LAN1 3 CPU1 CPU2 CPU2 CPU1 C...

Страница 46: ...JD1 Speaker Power LED Indicator JF1 Front Panel Control Header JF2 LAN3 NIC3 LAN4 NIC4 LED Headers JIPMB1 4 pin External BMC I2 C Header for an IPMI Card JPI2 C1 System Management SMBbus I2 C Header...

Страница 47: ...nector Warning on Pg 1 6 JPW2 3 12V 8 Pin Power Connectors See Warning on Pg 1 6 JPW4 12V 4 Pin Power Connectors See Warning on Pg 1 6 JSD1 SATA DOM Device on Module Power Connector JSTBY1 5V Standby...

Страница 48: ...22 5V 10 12V 23 5V 11 12V 24 COM 12 3 3V Reset Button Pin Definitions JF1 Pin Definition 3 Reset 4 Ground Power Button Pin Definitions JF1 Pin Definition 1 Power Signal 2 Ground Secondary Power Conne...

Страница 49: ...ons JF1 Pin Definition 7 Vcc 8 Ground NIC2 LED Pin Definitions JF1 Pin Definition 9 Vcc 10 Ground HDD LED Pin Definitions JF1 Pin Definition 13 Vcc 14 HD Active NIC2 JLAN2 LED The LED connections for...

Страница 50: ...table on the right for pin definitions NMI Button Pin Definitions JF1 Pin Definition 19 Control 20 Ground Fan Header Pin Definitions FAN1 8 Pin Definition 1 Ground Black 2 12V Red 3 Tachometer 4 PWR...

Страница 51: ...n be used to provide audible indica tions for various beep codes See the table on the right for pin definitions Internal Buzzer SP1 Pin Definition Pin Definitions Pin 1 Pos Beep In Pin 2 Neg Alarm Spe...

Страница 52: ...the table on the right for pin definitions SGPIO Header Pin Definitions Pin Definition Pin Definition 1 NC 2 NC 3 Ground 4 DATA Out 5 Load 6 Ground 7 Clock 8 NC NC No Connection Back Panel USB USB 0...

Страница 53: ...4 Ground 5 3 3V Standby Power Header The 5V Standby Power header is located at JSTBY1 on the mother board See the table on the right for pin definitions You must also have a card with a Standby Power...

Страница 54: ...4 ports on the backplane The Rear UID LED LE2 is located next to the UID switch The control panel UID LED connection is on pins 7 8 of JF1 Connect a cable to pin 8 on JF1 for Front Panel UID LED indic...

Страница 55: ...used to clear CMOS which will also clear any passwords Instead of pins this jumper consists of contact pads to prevent accidentally clearing the contents of CMOS To clear CMOS 1 First power down the...

Страница 56: ...ts on the serverboard See the table on the right for jumper settings GLAN Enable Jumper Settings Jumper Setting Definition 1 2 Enabled default 2 3 Disabled Watch Dog Enable Disable Watch Dog is a syst...

Страница 57: ...g any components See the table on the right for more details IPMI Dedicated LAN LEDs An additional IPMI Dedicated LAN is also located on the I O backplane The amber LED on the right indicates activity...

Страница 58: ...HostRAID User s Guide posted on our website http www supermicro com Serial ATA Ports There are six Serial ATA Ports I SATA0 I SATA 5 located on the serverboard including four SATA2 ports and two SATA...

Страница 59: ...ed with your serverboard Driver Tool Installation Display Screen Note Click the icons showing a hand writing on paper to view the readme files for each item Click the computer icons to the right of th...

Страница 60: ...vironment and operations of your system SuperDoctor III displays crucial system information such as CPU temperature system voltages and fan status See the Figure below for a display of the SuperDoctor...

Страница 61: ...Interface Display Screen Remote Control Note The SuperDoctor III program and User s Manual can be downloaded from the Supermicro web site at http www supermicro com products accessories software Supe...

Страница 62: ...5 32 SUPERSTORAGESYSTEM 6047R E1R36L User s Manual Notes...

Страница 63: ...em very carefully The following measures are generally sufficient to protect your equipment from ESD damage Precautions Use a grounded wrist strap designed to prevent static discharge Touch a grounded...

Страница 64: ...ed these wires together to simplify the connection Connect the cable from JF1 on the serverboard to the Control Panel PCB printed circuit board Make sure the red wire plugs into pin 1 on both connecto...

Страница 65: ...riods of time do NOT operate the server without the cover in place The chassis cover must be in place to allow proper airflow and prevent overheating 1 2 1 2 1 2 1 2 1 3 Removing the Chassis Cover 1 U...

Страница 66: ...ed fan Remove the top chassis cover while the system is still running to determine which of the fans has failed Replacing System Fans Removing a Fan 1 Remove the top chassis cover while the system is...

Страница 67: ...remove power to replace or swap SATA drives Proceed to the next step for instructions Note You must use standard 1 high drives in the SuperServer 6047R E1R36L DVD ROM Floppy Disk Drive For installing...

Страница 68: ...drive carrier straight out Installing a Hard Drive to the Hard Drive Tray 1 Remove the two screws securing the dummy drive to the drive tray and remove the dummy drive Place the hard drive tray on a...

Страница 69: ...es plug into a backplane that provides power drive ID and bus termi nation A RAID controller can be used with the backplane to provide data security The operating system you use must have RAID support...

Страница 70: ...place when the system is operating please follow this procedure Air shrouds concentrate airflow to maximize fan efficiency The SC846 chassis air shroud does not require screws to set up Installing th...

Страница 71: ...ur round washers and four screws with the holes in the hard drive and the holes in the bracket 2 Secure the hard drive to the bracket using the screws and washers provided 3 See the instructions below...

Страница 72: ...e and remain on until the failed module has been replaced Replacements can be ordered directly from Supermicro see contact information in the Preface The power supply modules have a hot swap capabilit...

Страница 73: ...OD Expansion Chassis The SSG 6047R E1R36L features dual JBOD expansion ports The figure below illustrates the recommended expansion strategy The JBOD attachment will vary depending on the specific JBO...

Страница 74: ...12 SUPERSTORAGESYSTEM 6047R E1R36L User s Manual Figure 6 8 JBOD Expansion Port JBOD OUT downstream ports JBOD OUT downstream port JBOD OUT downstream port JBOD IN upstream port JBOD IN upstream port...

Страница 75: ...the options that can be configured Grayed out options cannot be configured Options in blue can be configured by the user The right frame displays the key legend Above the key legend is an area reserve...

Страница 76: ...tility From the main menu you can access the other setup screens An AMI BIOS identification string is displayed at the left bottom corner of the screen below the copyright message Warning Do not upgra...

Страница 77: ...key to move between fields The date must be entered in Day MM DD YY format The time is entered in HH MM SS format Note The time is in the 24 hour format For example 5 30 P M appears as 17 30 00 Super...

Страница 78: ...set the display mode for the Option ROM Select Keep Current to use the current AddOn ROM Display setting Select Force BIOS to use the Option ROM display mode set by the system BIOS The options are Ke...

Страница 79: ...s feature is set to 4 Seconds Override the system will power off when the user presses the power button for 4 seconds or longer The options are Instant Off and 4 Seconds Override Restore on AC Power L...

Страница 80: ...nts whenever needed The options are Disabled and Enabled RTID Record Types IDs This feature displays the total number of Record Type IDs for local and remote pools The options are Optimal and Alternat...

Страница 81: ...feature is set to Disabled The CPU prefetches the cache line for 64 bytes If this feature is set to Enabled the CPU fetches both cache lines for 128 bytes as comprised The options are Disabled and Ena...

Страница 82: ...Available when Power Technology is set to Custom Select Enabled to use the Turbo Mode to boost system performance The options are Enabled and Disabled C1E Support Available when Power Technology is se...

Страница 83: ...n Power Limit This item displays the power limit in watts set by the user during which long duration power is maintained The default setting is 0 Factory Long Duration Maintained This item displays th...

Страница 84: ...stem resource for other tasks The options are Disabled and Enabled DCA Support When set to Enabled this feature uses Intel s DCA Direct Cache Access Technology to improve data transfer efficiency The...

Страница 85: ...ns are Enabled and Disabled QPI Quick Path Interconnect Link Speed Mode Use this feature to select data transfer speed for QPI Link connections The options are Slow and Fast QPI Link Frequency Select...

Страница 86: ...n the specification The options are Force DDR3 800 Force DDR3 1066 Force DDR3 1333 Force DDR3 1600 and Force SPD and Auto Channel Interleaving This feature selects from the different channel interleav...

Страница 87: ...for the Intel PCH chip PCH Information This feature displays the following PCH information Name This item displays the name of the PCH chip Stepping This item displays the status of the PCH stepping U...

Страница 88: ...ATA port as detected by the BIOS SATA Mode Use this feature to configure SATA mode for a selected SATA port The options are Disabled IDE Mode AHCI Mode and RAID Mode The following are displayed depend...

Страница 89: ...nabled to enable hot plug support for the particular port The options are Enabled and Disabled XPCIe PCI PnP Configuration PCI ROM Priority Use this feature to select the Option ROM to boot the system...

Страница 90: ...support The options are Disabled Force L0s and Auto Warning Enabling ASPM support may cause some PCI E devices to fail CPU1 Slot 1 PCI E 3 0 x8 OPROM CPU1 Slot 2 PCI E 3 0 x8 OPROM CPU2 Slot 3 PCI E...

Страница 91: ...item displays the settings of Serial Port 1 Change Settings This option specifies the base I O port address and the Interrupt Request address of Serial Port 1 Select Disabled to prevent the serial por...

Страница 92: ...re the following Console Redirection settings for a COM Port specified by the user Console Redirection Select Enabled to use a COM Port selected by the user for Console Redirection The options are Ena...

Страница 93: ...end of a serial data packet Select 1 Stop Bit for standard serial data communication Select 2 Stop Bits if slower devices are used The options are 1 and 2 Flow Control This feature allows the user to...

Страница 94: ...ate with a remote server The options are COM1 and COM2 SOL Terminal Type This feature allows the user to select the target terminal emulation type for Con sole Redirection Select VT100 to use the ASCI...

Страница 95: ...ess ACPI support The options are Enabled and Disabled High Precision Event Timer Select Enabled to activate the High Precision Event Timer HPET that produces periodic interrupts at a much higher frequ...

Страница 96: ...ly ac tive or deactivated TPM Owner Status This item displays the status of TPM Ownership XIntel TXT LT SX Configuration Intel TXT LT SX Hardware Support This feature indicates if the following hardwa...

Страница 97: ...use IQN format The following actions can also be performed Add an Attempt Delete Attempts Commit Discard Changes and Exit Change Attempt Order Commit Discard Changes and Exit Intel Ethernet Controller...

Страница 98: ...fy the duration for LEDs to blink The range is from 0 15 seconds The default setting is 0 PORT CONFIGURATION INFORMATION This section displays the following port information UEFI Driver Adapter PBA Ch...

Страница 99: ...tem Management BIOS Event Logging during system boot The options are Enabled and Disabled Runtime Error Logging Support Select Enabled to support Runtime Error Logging The options are Enabled and Disa...

Страница 100: ...othing and Erase Immediately SMBIOS Event Log Standard Settings Log System Boot Event Select Enabled to log system boot events The options are Disabled and Enabled MECI Multiple Event Count Increment...

Страница 101: ...stalled in your system XSystem Event Log Enabling Disabling Options SEL Components Select Enabled for all system event logging at bootup The options are Enabled and Disabled Erasing Settings Erase SEL...

Страница 102: ...ake effect when the system is rebooted The options are No and Yes Configuration Address Source This feature allows the user to select the source of the IP address for this computer If Static is select...

Страница 103: ...ystem Boot Option Priorities Boot Option 1 Boot Option 2 Boot Option 3 etc Use this feature to specify the sequence of boot device priority Network Devices Hard Disk Drives Use these options to set th...

Страница 104: ...when a password entry is required Select Setup to require the password only when entering setup Select Always to require the pass word when entering setup and on each boot The options are Setup and Al...

Страница 105: ...Reset When you have completed the system configuration changes select this option to save the changes and reboot the computer so that the new system configuration settings can take effect Select Save...

Страница 106: ...Defaults Select this feature and press Enter to save the current settings as the user s defaults When the dialog box appears asking you if you want to save values as user s defaults select Yes to sav...

Страница 107: ...system manufacturer for possible repairs These fatal errors are usually communicated through a series of audible beeps The numbers on the fatal error list correspond to the number of beeps for the cor...

Страница 108: ...A 2 SUPERSTORAGESYSTEM 6047R E1R36L User s Manual Notes...

Страница 109: ...up to 512 GB of registered ECC DDR3 1333 1066 800 Registered memory RDIMM or up to 128 GB of ECC non ECC DDR3 Unbuffered memory UDIMM Note see Section 5 6 for details Drive Bays Thirty six hot swap dr...

Страница 110: ...280W Part PWS 1K28P SQ Rated Output Voltages 1000W 12V 83A 5Vsb 4A 1280W 12V 106 7A 5Vsb 4A System Input Requirements AC Input Voltage 100 240V AC auto range Rated Input Current 1000W output 100 140V...

Страница 111: ...1000 4 4 EN 61000 4 5 EN 61000 4 6 EN 61000 4 8 EN 61000 4 11 Safety CSA EN IEC UL 60950 1 Compliant UL or CSA Listed USA and Canada CE Marking Europe California Best Management Practices Regulations...

Страница 112: ...to perform be reasonably expected to result in significant injury or loss of life or catastrophic property damage Accordingly Supermicro dis claims any and all liability and should buyer use or sell s...

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