Category
Setting
Notes
Injection group
(a set of 4 wells)
•
(Fragment/HID analysis only) Size
standard
• Run module
• Application type (mixed plate only)
• Dye set
•
(HID analysis only) Kit (for marker-to-
marker pull-up reduction)
User
‑
created size standards and dye sets are
accessible to all users.
User
‑
created run modules:
• Users can name and save run modules.
• If you create run modules in the
instrument software, the modules will
not be available to other users.
Well
• Sample name
•
(Fragment/HID analysis only) Sample
type
•
(Sequencing only) Specimen and
amplicon
• Custom fields 1–5
• Specimen and Amplicon fields are
useful in secondary analysis software
applications that organize sample data
files based on amplicon and specimen
information.
• Custom fields are text fields in which you
can include additional sample attributes
or identifiers. Custom fields can be used
by some secondary analysis applications.
(Optional)
Set up for auto export of sample data files (AB1 and FSA)
By default, sample data files (AB1 and FSA) are saved to the instrument.
When you create a plate setup, you can also set the Save location to Cloud, Network
Drive, and/or USB.
1
1
Save location
When the plate is run, the instrument automatically exports the sample data files to
the save locations.
Before you can select these save locations, set up the instrument:
• “Link the instrument to your Connect cloud-based platform account“ on page 136
• “Connect to a network drive“ on page 132
• Insert a USB into the USB port on the front of the instrument (Figure 1 on
Chapter 6
Create or modify a plate setup from the instrument
(Optional) Set up for auto export of sample data files (AB1 and FSA)
6
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SeqStudio
™
Genetic Analyzer Instrument and Software User Guide
