Zymo Research D4200-1-100 Instruction Manual Download Page 5

 

ZYMO RESEARCH CORP. 

Phone: (949) 679-

1190  ▪  Toll Free: (888) 882-9682  ▪  Fax: (949) 266-9452  ▪  [email protected]  ▪  www.zymoresearch.com

 

Page 4 

Buffer Preparation:

 

 

 

Add 46 ml of 95% ethanol to the 

12 ml

 

ZymoPURE

™ 

Wash 2 (Concentrate)

 (D4209), 88 

ml of 95% ethanol to the 

23 ml ZymoPURE

™ 

Wash 2 (Concentrate)

 (D4210), or 107 ml of 

95% ethanol to the 

28 ml ZymoPURE

™ 

Wash 2 (Concentrate)

 (D4211 & D4212) before 

use. 
 

 

The 

ZymoPURE

 P2

 and 

ZymoPURE

 Binding Buffer

 may have precipitated.  If this 

occurs, dissolve the precipitate by incubating the bottles at 30-37 ºC for 10-20 minutes and 
mix by inversion.  Do not microwave!  

 

 

Before Starting:

 Incubate 

ZymoPURE

 P3

 on ice for 30 minutes before use. 

 

 

Protocol:

 

 

 

The following procedure should be performed at room temperature (15-30°C).  

 

1.  Centrifuge 0.5-5 ml

1

 of bacterial culture in a clear 1.5 ml tube at full speed for 15-

20 seconds in a microcentrifuge. Discard supernatant. 
 

2.  Add 250 

µ

l of 

ZymoPURE

 

P1 (Red)

 to the bacterial cell pellet and resuspend 

completely by vortexing or pipetting. 

 

3.  Add 250 

µ

l of 

ZymoPURE

 P2 (Green)

 and immediately mix by gently inverting 

the tube 6-8 times. Do not vortex! Let sit at room temperature for 2-3 minutes

2

.  

Cells are completely lysed when the solution appears clear, purple, and viscous.

   

 

4.  Add 250 

µ

l of ice cold 

ZymoPURE

 P3 (Yellow)

 and mix thoroughly by inversion.  

Do not vortex!  Invert the tube an additional 3-4 times after the sample turns 
completely yellow.  

The sample will turn yellow when the neutralization is complete 

and a yellowish precipitate will form.

 

 

5.  Incubate the neutralized lysate on ice for 5 minutes. 

 

 

6.  Centrifuge the neutralized lysate for 5 minutes at 16,000 

x g

 

7.  Transfer 600 

µ

l of supernatant from step 6 into a clean 1.5 ml microcentrifuge tube.  

Be careful not to disturb the yellow pellet and avoid transferring any cellular debris 
to the new tube.   

 

8.  Add 275 

µ

l of 

ZymoPURE

 Binding Buffer 

to the cleared lysate from step 7 and 

mix thoroughly by inverting the capped tube 8 times.

 

 

To continue processing the lysate using the recommended vacuum protocol, 
proceed to the next page.  If a vacuum is not available, proceed to page 6 for an 
alternative centrifugation method. 
 
 

 

 
 

 
For 

Technical Assistance

please contact us at 
1-888-882-9682 or E-mail 
[email protected]

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
Notes: 
 

1

 Depending on the volume 

of bacterial culture it may be 
necessary to repeat Step 1 
several times. 

 
 

 

 

 

2

 Do not allow the lysis 

reaction to proceed for more 
than 3 minutes. Excessive 
lysis can result in denatured 
plasmid DNA. When 
processing a large number 
of samples, work with 
groups of 

≤ 10 at a time. 

 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
  

Summary of Contents for D4200-1-100

Page 1: ...fication of up to 100 g of transfection grade plasmid DNA using a spin column Innovative ZymoPURE technology enables elution of ultra pure endotoxin free plasmid DNA in as little as 25 l Contents Prod...

Page 2: ...20 minutes and mix by inversion Do not microwave 4 ZymoPURE Wash 2 included with D4208S is supplied ready to use and does not require the addition of ethanol prior to use ZymoPURE Wash 2 included wit...

Page 3: ...ed to ensure the plasmid DNA is free of endotoxins salt protein and RNA The result is plasmid DNA suitable for transfection restriction endonuclease digestion bacterial transformation PCR amplificatio...

Page 4: ...ZYMO RESEARCH CORP Phone 949 679 1190 Toll Free 888 882 9682 Fax 949 266 9452 info zymoresearch com www zymoresearch com Page 3 Procedure Overview...

Page 5: ...y lysed when the solution appears clear purple and viscous 4 Add 250 l of ice cold ZymoPURE P3 Yellow and mix thoroughly by inversion Do not vortex Invert the tube an additional 3 4 times after the sa...

Page 6: ...through the column 13 With the vacuum off add 200 l of ZymoPURE Wash 2 to the Zymo Spin II P Column Turn on the vacuum until all of the liquid has passed completely through the column 14 Place the Zy...

Page 7: ...oPURE Wash 2 to the Zymo Spin II P Column and centrifuge at 5 000 x g for 1 min Discard the flow through 14 Centrifuge the Zymo Spin II P Column at 10 000 x g for 1 minute in order to remove any resid...

Page 8: ...l of supernatant was recovered after pelleting the lysate debris For optimal performance add 275 l of ZymoPURE Binding Buffer to 600 l of clarified lysate ZymoPURE P2 and ZymoPURE Binding Buffer preci...

Page 9: ...l 210 ml D4200 1 3 D4200 1 13 D4200 1 100 D4200 1 210 ZymoPURE P2 Green 3 ml 13 ml 100 ml 210 ml D4200 2 3 D4200 2 13 D4200 2 100 D4200 2 210 ZymoPURE P3 Yellow 3 ml 13 ml 100 ml 210 ml D4200 3 3 D420...

Page 10: ...ZYMO RESEARCH CORP Phone 949 679 1190 Toll Free 888 882 9682 Fax 949 266 9452 info zymoresearch com www zymoresearch com Page 9...

Page 11: ...ZYMO RESEARCH CORP Phone 949 679 1190 Toll Free 888 882 9682 Fax 949 266 9452 info zymoresearch com www zymoresearch com Page 10...

Page 12: ...ZYMO RESEARCH CORP Phone 949 679 1190 Toll Free 888 882 9682 Fax 949 266 9452 info zymoresearch com www zymoresearch com...

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