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Appendix C: Software Installation Instructions

C-3

Supero Doctor III Interface Display Screen-II (Remote Control)

Note

: SD III Software Revision 1.0 can be downloaded from our Web

site at: ftp://ftp.supermicro.com/utility/Supero_Doctor_III/. You can also

download SDIII User's Guide at: http://www.supermicro.com/PRODUCT/

Manuals/SDIII/UserGuide.pdf. For Linux, we will still recommend that you

use Supero Doctor II.

Summary of Contents for Super X8DTL-3

Page 1: ...X8DTL 3 X8DTL i USER S MANUAL Revision 1 0a X8DTL 3F X8DTL iF...

Page 2: ...ERMICRO SHALL NOT HAVE LIABILITY FOR ANY HARDWARE SOFTWARE OR DATA STORED OR USED WITH THE PRODUCT INCLUDING THE COSTS OF REPAIRING REPLACING INTEGRATING INSTALLING OR RECOVERING SUCH HARDWARE SOFTWAR...

Page 3: ...intended to be installed and serviced by professional technicians Manual Organization Chapter 1 describes the features specifications and performance of the mother board and provides detailed informat...

Page 4: ...iven to ensure proper system installation or to prevent damage to the components Note Additional Information given to differentiate various models or to ensure correct system setup X8DTL 3 X8DTL i X8D...

Page 5: ...Micro Computer B V Het Sterrenbeeld 28 5215 ML s Hertogenbosch The Netherlands Tel 31 0 73 6400390 Fax 31 0 73 6416525 Email sales supermicro nl General Information support supermicro nl Technical Su...

Page 6: ...er Supply 1 12 1 8 Super I O 1 12 1 9 Overview of the Winbond WPCM450 Controller For X8DTL 3F X8DTL iF Only 1 13 Chapter 2 Installation 1 2 1 Static Sensitive Devices 2 1 Precautions 2 1 Unpacking 2 1...

Page 7: ...Fail JOH1 2 23 T SGPIO 1 2 3 SGPIO 1 2 Headers 2 24 I Button 2 24 Power SMB I2 C Connector 2 25 IPMB 2 25 Unit Identification Switch LEDs 2 26 2 7 Jumper Settings 2 27 Explanation of Jumpers 2 27 GLA...

Page 8: ...Configuration Data 4 1 Starting the Setup Utility 4 2 4 2 Main Setup 4 2 4 3 Advanced Setup Configurations 4 4 4 4 Security Settings 4 23 4 5 Boot Configuration 4 25 4 6 Exit Options 4 26 4 7 BIOS Rec...

Page 9: ...that the following items have all been included with your motherboard If anything listed here is damaged or missing contact your retailer The following items are included in the retail box One 1 Supe...

Page 10: ...X8DTL 3F X8DTL iF Image Note The drawings and pictures shown in this manual were based on the latest PCB Revision available at the time of publishing of the manual The motherboard you ve received may...

Page 11: ...nuals X8DTL 3 X8DTL i X8DTL 3F X8DTL iF Layout JPW3 JPW2 JBT1 JPI2C COM1 I SATA0 I Button JPS1 JWD JPL2 JPL1 JF1 SP1 1 JWOL LE1 D20 JBAT1 JP3 JL1 JPS2 JOH1 JPB JP5 J16 JD1 CPU2 FAN Slot3 PCI E 1 0 x4...

Page 12: ...sure to provide adequate airflow to the system Notes Quick Reference JPW3 JPW2 JBT1 JPI2C COM1 I SATA0 I Button JPS1 JWD JPL2 JPL1 JF1 SP1 1 JWOL LE1 D20 JBAT1 JP3 JL1 JPS2 JOH1 JPB JP5 J16 JD1 CPU2...

Page 13: ...RAID data storage IPMB IPMB I2 C Header for an IPMI card X8DTL iF 3F JPI2 C Power Supply SMBbus I2 C Header JD1 PWR LED Speaker Header Pins 4 7 Speaker JF1 Front Panel Connector JL1 Chassis Intrusion...

Page 14: ...t 3 Two 32 bit PCI 33 slot Slot 1 and Slot 2 BIOS 32 Mb AMI SPI Flash ROM PCI 2 2 ACPI 1 0 2 0 3 0 Plug and Play PnP DMI 2 3 USB Keyboard sup port and SMBIOS 2 3 PC Health Monitoring Onboard voltage m...

Page 15: ...n USB 2 0 Universal Serial Bus 2 Backpanel USB Ports 1 Front USB Header and 2 Type A Headers Super I O Winbond W83627DHG P IPMI 1 5 2 0 with full KVM support X8DTL 3F iF only Note 3 Other Wake on LAN...

Page 16: ...1 SATA SIO W83527DHG P LPC PS2 KB MS CLINK x4 x8 ICH10R 9 10 DMI Port Ports1 2 7 8 CPU1 CSI Port 5 Port 6 DDR3 DIMM DDR3 DIMM DDR3 DIMM DDR3 DIMM DDR3 DIMM B C BMC VGA CONN COM1 COM2 USB PCI E x16 Slo...

Page 17: ...forwarded clock A full width QPI link pair provides 84 signals Each processor supports two QuickPath links one going to the other processor and the other to the 5500 North Bridge The 5500 Platform sup...

Page 18: ...Users can adjust the voltage thresholds to define the sensitivity of the voltage monitor Fan Status Monitor with Firmware Control The PC health monitor can check the RPM status of the cooling fans The...

Page 19: ...ing Systems Slow Blinking LED for Suspend State Indicator When the CPU goes into a suspend state the chassis power LED will start blinking to indicate that the CPU is in suspend mode When the user pre...

Page 20: ...for adequate power supply to your system Failure in doing so will void the manufacturer warranty on your power supply and motherboard It is strongly recommended that you use a high quality power supp...

Page 21: ...e WPCM450 Controller is ideal for legacy reduced server platforms The WPCM450 interfaces with the host system via a PCI interface to communicate with the Graphics core It supports USB 2 0 and 1 1 for...

Page 22: ...1 14 X8DTL 3 X8DTL i X8DTL 3F X8DTL iF User s Manual Notes...

Page 23: ...not touch its components peripheral chips memory modules or gold contacts When handling chips or modules avoid touching their pins Put the motherboard and peripherals back into their antistatic bags...

Page 24: ...n the chassis 8 X8DTL Series Tools Needed 1 Phillips Screwdriver 2 Pan head 6 screws Installation Instructions Install the IO shield into the chassis 1 Locate the mounting holes on the moth 2 erboard...

Page 25: ...nd heatsink fans When purchasing a motherboard without a 5500 Series processor pre 3 installed make sure that the CPU socket plastic cap is in place and none of the CPU socket pins are bent otherwise...

Page 26: ...U against the surface of the socket or its pins to avoid dam aging the CPU or the socket With the CPU inside the socket 4 inspect the four corners of the CPU to make sure that the CPU is properly inst...

Page 27: ...p plied Screw 1 Screw 2 Install Screw 1 Place the heatsink on top of the 2 CPU so that the four mounting holes are aligned with those on the retention mechanism 3 Install two diagonal screws ie the 1...

Page 28: ...oosen and 3 remove the heatsink screws from the motherboard in the se quence as show in the picture on the right Hold the heatsink as shown 4 in the picture on the right and gently wriggle the heatsin...

Page 29: ...speed in the same bank Press down the release tabs on the ends of a memory 2 slot Insert each DIMM module vertically into its slot Pay attention to the notch along the bottom of the module to prevent...

Page 30: ...nch 2 3 DIMMs P2 1A P2 2A P2 3A Memory Population for Optimal Performance For a motherboard with Two CPUs installed CPU1 To populate P1 DIMMs CPU2 To populate P2 DIMMs Branch 0 Branch 1 Branch 2 Branc...

Page 31: ...emory System BIOS 1 MB 3 99 GB Local APIC 4 KB 3 99 GB Area Reserved for the chipset 2 MB 3 99 GB I O APIC 4 Kbytes 4 KB 3 99 GB PCI Enumeration Area 1 256 MB 3 76 GB PCI Express 256 MB 256 MB 3 51 GB...

Page 32: ...SATA3 I SATA2 I SATA4 I SATA1 3 SGPIO2 3 SGPIO1 LSI SAS1068E SAS0 FAN5 FAN4 FAN6 FAN1 CPU1 LAN2 IPMI LAN LAN CTRL SAS7 JI2C1 LAN CTRL PHY Chip CPU2 Intel Intel JPW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x...

Page 33: ...the table at right for pin definitions PS 2 Keyboard Mouse Pin Definitions PS2 Keyboard PS2 Mouse Pin Definition Pin Definition 1 KB Data 1 Mouse Data 2 No Connection 2 No Connection 3 Ground 3 Groun...

Page 34: ...SB con nections USB 2 3 4 5 6 are on the motherboard to provide front chassis access Cables are not included See the tables on the right for pin definitions Back Panel USB USB 0 1 Pin Definitions 1 5V...

Page 35: ...support See the table on the right for pin definitions Serial Ports COM1 COM2 Pin Definitions Pin Definition Pin Definition 1 DCD 6 DSR 2 RXD 7 RTS 3 TXD 8 CTS 4 DTR 9 RI 5 Ground 10 N A 1 COM1 2 COM...

Page 36: ...8DTL 3F iF to provide KVM support for IPMI 2 0 All these ports accept RJ45 type cables Note Please refer to the LED Indicator Sec tion for LAN LED information LAN Ports Pin Definition Pin Definition 1...

Page 37: ...ically for use with Supermicro server chassis See the figure below for the descriptions of the various control panel buttons and LED indicators Refer to the following section for descriptions and pin...

Page 38: ...Power LED connection is located on pins 15 and 16 of JF1 Refer to the table on the right for pin definitions NMI Button The non maskable interrupt button header is located on pins 19 and 20 of JF1 Ref...

Page 39: ...1 and 12 of JF1 and the LED connection for GLAN Port 2 is on Pins 9 and 10 Attach the NIC LED cables to display network activity Refer to the table on the right for pin definitions GLAN1 2 LED Pin Def...

Page 40: ...PWR Fail LED Pin Definitions JF1 Pin Definition 5 Vcc 6 Ground A B A OH Fan Fail UID LEDs B PWR Supply Fail X8DTL Series Overheat OH Fan Fail Front UID LED Connect an LED cable to the Front UID and OH...

Page 41: ...ed to function as a suspend button with a setting in the BIOS see Chapter 4 To turn off the power when set to suspend mode press the button for at least 4 seconds Refer to the table on the right for p...

Page 42: ...mainpowersupplyconnector JPW1 and two 8 pin CPU PWR connectors JPW2 JPW3 on the motherboard These power connectors meet the SSI EPS 12V specifi cation In addition to the 24 pin ATX power connector the...

Page 43: ...Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 Chassis Intrusion A Chassis Intrusion header is located at JL1 on the motherboard Attach an appropriate cable from the chassis to inform you of a chassi...

Page 44: ...x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 B A A Internal Speaker Buzzer B PWR LED Speaker Power LED Speaker On the JD1 header pins 1 3 are used for power LED indication and...

Page 45: ...LAN CTRL SAS7 JI2C1 LAN CTRL PHY Chip CPU2 Intel Intel JPW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 Wake On LAN The Wake On LAN header is...

Page 46: ...AN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 A B A T SGPIO 1 B T SGPIO 2 C 3T SGPIO 1 X8DTL 3 3F D 3T SGPIO 2 X8DTL 3 3F E I Button C T SGPIO 1 2 3...

Page 47: ...SATA4 I SATA1 3 SGPIO2 3 SGPIO1 LSI SAS1068E SAS0 FAN5 FAN4 FAN6 FAN1 CPU1 LAN2 IPMI LAN LAN CTRL SAS7 JI2C1 LAN CTRL PHY Chip CPU2 Intel Intel JPW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8...

Page 48: ...N2 IPMI LAN LAN CTRL SAS7 JI2C1 LAN CTRL PHY Chip CPU2 Intel Intel JPW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 A B A Rear UID Switch B Re...

Page 49: ...JPW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 2 7 Jumper Settings Explanation of Jumpers To modify the operation of the mother board jumpe...

Page 50: ...MOS Clear JBT1 is used to clear CMOS Instead of pins this jumper consists of contact pads to prevent the accidental clearing of CMOS To clear CMOS use a metal object such as a small screwdriver to tou...

Page 51: ...LAN LAN CTRL SAS7 JI2C1 LAN CTRL PHY Chip CPU2 Intel Intel JPW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 A A JI2 C1 B JI2 C2 C VGA Enable B...

Page 52: ...PW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 A A SAS Enable B SAS RAID Config Se lect B SAS Enable Disable X8DTL 3 X8DTL 3F only Jumper JPS...

Page 53: ...AN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 A A Manufacture Mode B ME Recovery Mode B Manufacture Mode X8DTL iF 3F Jumper JP3 allows the user to flash...

Page 54: ...F 3F GLAN LEDs Two LAN ports LAN 1 LAN 2 are located on the IO Backplane of the motherboard In addition LAN3 LAN4 are located on the X8DTL 3 i LN4F Each Ethernet LAN port has two LEDs The yellow LED i...

Page 55: ...TA1 3 SGPIO2 3 SGPIO1 LSI SAS1068E SAS0 FAN5 FAN4 FAN6 FAN1 CPU1 LAN2 IPMI LAN LAN CTRL SAS7 JI2C1 LAN CTRL PHY Chip CPU2 Intel Intel JPW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series...

Page 56: ...LAN CTRL PHY Chip CPU2 Intel Intel JPW1 CPU1FAN FAN2 BIOS Slot5 PCI E 2 0 x4 in x8 Slot X8DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 A Onboard Power LED An Onboard Power LED is located at LE1...

Page 57: ...DTL Series Flash ROM BMC Battery Buzzer 1 FAN3 JPG1 Serial ATA Pin Definitions Pin Definition 1 Ground 2 TX_P 3 TX_N 4 Ground 5 RX_N 6 RX_P 7 Ground A I SATA0 5 B SAS 0 7 X8DTL 3 3F Serial ATA Ports T...

Page 58: ...2 36 X8DTL 3 X8DTL i X8DTL 3F X8DTL iF User s Manual Notes...

Page 59: ...and 1 chassis Disconnect all ribbon wire cables from the motherboard including those for 2 the keyboard and mouse Remove all add on cards 3 Install CPU 1 first making sure it is fully seated and conn...

Page 60: ...t your 3 vendor for repairs Memory Errors When a No_Memory_Beep_Code is issued by the system check the following Make sure that the DIMM modules are properly and fully installed 1 Check if different s...

Page 61: ...following information when 3 contacting Supermicro for technical support Motherboard model and PCB revision number BIOS release date version this can be seen on the initial display when your system f...

Page 62: ...CMOS as indi cated on Page 2 28 Note 2 The SPI BIOS chip used on this motherboard cannot be removed Send your motherboard back to our RMA Department for repair Question What s on the CD that came wit...

Page 63: ...ions cannot be configured Options in blue can be configured by the user The right frame displays the key legend Above the key legend is an area reserved for a text message When an option is selected i...

Page 64: ...damages arising from a BIOS update If you have to update the BIOS do not shut down or reset the system while the BIOS is updating This is to avoid possible boot failure 4 2 Main Setup When you first e...

Page 65: ...therboard Speed This item displays the speed of the CPU detected by the BIOS Physical Count This item displays the number of processors installed in your system as detected by the BIOS Logical Count T...

Page 66: ...e bootup screen options to be modified between POST mes sages or the OEM logo Select Disabled to display the POST messages Select Enabled to display the OEM logo instead of the normal POST messages Th...

Page 67: ...elect Power On for the system power to be turned on after a power loss Select Last State to allow the system to resume its last state before a power loss The options are Power On Power Off and Last St...

Page 68: ...evel of Electromagnetic Interference caused by the components whenever needed The options are Disabled and Enabled Hardware Prefetcher Available when supported by the CPU If set to Enabled the hardwar...

Page 69: ...are All 1 and 2 Intel EIST Technology EIST Enhanced Intel SpeedStep Technology allows the system to automatically adjust processor voltage and core frequency in an effort to reduce power consump tion...

Page 70: ...ocessing of this add on card For this moth erboard the TOE device is built inside the ESB 2 South Bridge chip This feature is supported only by some types of processors i e Intel Nehalem WS 1S The opt...

Page 71: ...fail over The spare memory is put online and used as active memory in place of the failed memory Demand Scrubbing A memory error correction scheme where the processor writes corrected data back into t...

Page 72: ...0 301 600 601 900 901 1200 1201 1500 1501 1800 1801 2100 2101 2400 2401 2700 2701 3000 DIMM Pitch This is the physical space between each DIMM module Each step is in 1 1000 of an inch The default is 4...

Page 73: ...USB ports 6 USB ports 8 USB ports 10 USB ports and 12 USB ports USB 2 0 Controller Select Enabled to activate the onboard USB2 0 controller The options are En abled and Disabled Legacy USB Support Sel...

Page 74: ...e The options are Disabled and Enhanced IDE Detect Timeout sec Use this feature to set the time out value for the BIOS to detect the ATA ATAPI devices installed in the system The options are 0 sec 5 1...

Page 75: ...OS to use PIO mode 0 It has a data transfer rate of 3 3 MBs Select 1 to allow the AMI BIOS to use PIO mode 1 It has a data transfer rate of 5 2 MBs Select 2 to allow the AMI BIOS to use PIO mode 2 It...

Page 76: ...IOS to use Ultra DMA mode 6 It has a data transfer rate of 133 MBs The options are Auto SWDMAn MWDMAn and UDMAn S M A R T For Hard disk drives Self Monitoring Analysis and Reporting Technology SMART c...

Page 77: ...Load Onboard LAN2 Option ROM Select Enabled to enable the onboard LAN1 or LAN2 Option ROM This is to boot computer using a network interface The options are Enabled and Disabled Boot Graphics Adapter...

Page 78: ...er to set the flow control for Console Redirection The options are None Hardware and Software Redirection After BIOS POST Select Disabled to turn off Console Redirection after Power On Self Test POST...

Page 79: ...y the CPU manufacturer The Default Alarm Select this setting if you want the CPU overheat alarm including the LED and the buzzer to be triggered when the CPU temperature reaches about 5oC above the th...

Page 80: ...Temperature Tolerance has been assigned at the factory and is the baseline on which the motherboard takes action during different CPU temperature conditions i e by increasing CPU Fan speed triggering...

Page 81: ...gher frequency than a Real time Clock RTC does in synchronizing multimedia streams providing smooth playback and reducing the de pendency on other timestamp calculation devices such as an x86 RDTSC In...

Page 82: ...on on the IPMI specifications please visit Intel s website at www intel com IPMI Firmware Revision This item displays the current IPMI firmware revision Status of BMC Baseboard Management Controller B...

Page 83: ...status for the Channel Number selected above Channel Number is OK or Wrong Channel Number IP Address Source Select the source of this machine s IP address If Static is selected you will need to know...

Page 84: ...actions based on BMC events The options are Alert Power Down Reset System Power Cycle OEM Action Diagnostic Interface Alert Startup Delay Available if the item PEF Support is enabled This feature inse...

Page 85: ...vents as read This option marks all events as read The options are OK and Cancel Clear event log This option clears the Event Log memory of all messages The options are OK and Cancel PCI Error Log Use...

Page 86: ...View Only to allow the user access to the Setup Utility and view the settings without making changes Select Limited to allow the user to change selected settings such as Date and Time Select No Acces...

Page 87: ...Device USB XXXXXXXXX 2nd Boot Device CD DVD XXXXXXXXX Hard Disk Drives This feature allows the user to specify the boot sequence from all available hard disk drives The settings are Disabled and a lis...

Page 88: ...return to the Setup Utility Load Optimal Defaults Select this item for the AMI BIOS to automatically load Optimal Defaults to the BIOS Settings in order to maximum system performance This option might...

Page 89: ...e the bootup process Notes BIOS Recovery described below is used when the main BIOS block crashes However when the BIOS Boot sector crashes you will need to send the motherboard back to Supermicro for...

Page 90: ...e Serial Flash for Boot Sector Recovery you will need to meet the following requirements The Target system the system that needs BIOS updates must have a serial port and Serial Flash support embedded...

Page 91: ...shing is starting and the new BIOS file is being uploaded 7 To use Hyper Terminal to transfer the XModem protocol by using the Send File dialog under the Transfer menu follow the instructions below to...

Page 92: ...h any terminal communications program that supports VT 100 and XModem protocols including protocols designed for GNU LINUX BSD operating systems such as minicom It is recommended that the terminal pro...

Page 93: ...should consult with your system manufac turer for possible repairs These fatal errors are usually communicated through a series of audible beeps The numbers on the fatal error list correspond to the n...

Page 94: ...A 2 X8DTL 3 X8DTL i X8DTL 3F X8DTL iF User s Manual Notes...

Page 95: ...AID driver displays When the Windows XP 2003 2008 Vista Setup screen appears press S to 3 specify additional device s Insert the driver diskette Intel AA RAID XP 2003 2008 Vista Driver for 4 ICH10R in...

Page 96: ...ith the OS installation The Windows OS Setup screen will display 2 From the Windows OS Setup screen press the Enter key The Windows 3 OS Setup will automatically load all device files and then continu...

Page 97: ...iew the entire contents of the CD 2 When making a storage driver diskette by booting into a Driver CD please set the SATA Configuration to Compatible Mode and configure SATA as IDE in the BIOS Setup A...

Page 98: ...o Doctor III displays crucial system information such as CPU temperature system voltages and fan status See the Figure below for a display of the Supero Doctor III interface Note 1 The default user na...

Page 99: ...te Control Note SD III Software Revision 1 0 can be downloaded from our Web site at ftp ftp supermicro com utility Supero_Doctor_III You can also download SDIII User s Guide at http www supermicro com...

Page 100: ...C 4 X8DTL 3 X8DTL i X8DTL 3F X8DTL iF User s Manual Notes...

Page 101: ...expected to result in significant injury or loss of life or catastrophic property damage Accordingly Supermicro disclaims any and all liability and should buyer use or sell such products for use in su...

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