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Last updated on Mar 2022 

Stage movement is 
not smooth/jerks 
around 

1.

 

Switch off the stage controller 

2.

 

Manually manipulate the stage to each of the 4 corners 

3.

 

Spray compressed air to dislodge any dust particles that may be 
causing issues. 

4.

 

Switch on the stage controller and restart the Fluoview 
software 

5.

 

Select “Yes” when you see the popup (shown below) asking if 

you want to execute the cleaning process for the stage unit.  

 

No signal during 
confocal scanning 

1.

 

Use the transmitted detector to check. If the specimen is thick 
and non-transparent, the specimen should be removed to first 
check for laser pass through to transmitted detector. For easier 
verification, standard specimen slides can be used as 
confirmation check.

 

2.

 

Check to see if scanning spot can be spotted on the specimen. 

3.

 

If there is no scanning spot: 

I.

 

Check that main laser key is switched on and the 
appropriate laser is switched on. 

II.

 

Check the laser rack to check the laser status light. 
Blinking light on the diode laser (which indicates laser 
starting up) has turned to a solid white or coloured light 
(sometimes red light might be indicative of error). 

III.

 

Restart the main controller right at the bottom if none of 
the steps taken work, especially if the machine has been 
left on by the previous user. 

Signal image not 
visible/too dim 
even at high laser 
power 

Check

: If fluorescence signal is visible on wide-field eyepiece.  

Check

: PMT settings if fluorescence can be seen on wide-field 

Ideal base settings are  

 

HV

: 350-500V for HSD, 600-800V for SD. 

You can set the HV 

higher for quick sample spotting, then when you find the sample 
you can tune the HV lower and increase laser power.

  

 

Gain: 

1x. 

Decreasing Gain reduces brightness and increasing 

Gain doesn’t increase the sensor’s sensitivity anyway. 

 

 

Offset:

 0%. 

Adjust it only after you find your sample

.  

 

Pinhole:

 Auto. 

When set to manual mode it may default to the 

smallest size which will make the signal very dark.

  

Control panel 
switches off when 
Live View is 
activated 

This is a feature by Olympus to allow a fully dark room during imaging 
that can be switched on/off when needed.  
To check status, go to Configuration > Preference tab > Microscope Link 
and check 

Turn the TPC backlight off during scanning 

and 

Turn the LED 

indicator off during scanning

. You can set them to your preferences.  

Содержание FV3000

Страница 1: ...oking and System Access 4 3 1 Acknowledgements 5 4 Operation Procedures 5 4 1 Switching ON Protocol 5 4 2 Objective lens 6 4 2 Software Initiation 7 4 3 Setting up directory to save images 8 4 4 Laser...

Страница 2: ...Immersion Oil Modern immersion oil has no known hazards to human beings so far yet they can cause discomfort to a person if the immersion oil has been left on skin for too long or inhaled Therefore pl...

Страница 3: ...taff before they are allowed to access the confocal system 2 1 To arrange a training session Please email Bioimaging Facility bioimaging tll org sg for a training session Fill in the necessary particu...

Страница 4: ...er 6pm Sat Sun Public holidays If users require more slots in a particular week they can book on weekdays during non peak hours after 6pm on weekends Sat and Sun and on public holidays If extra time i...

Страница 5: ...RT TIMING b Switch on the Master switch on the wall 1 PC 2 Wait until windows icon pops up c Switch on Stage controller box 3 CBH controller 4 d Optional Turn on the Metal Halide lamp 5 if needed e Tu...

Страница 6: ...t to 10x objective or lower then click YES Cleaning the stage will take some time b Otherwise click NO to skip cleaning 4 2 Objective lens Objective lens Immersion media 1 25x 0 04 Plan Apochromat Air...

Страница 7: ...n the stage mechanism This adds time to the initialization process Do not place anything on the stage mechanism until the initialization process is complete If you are not the first user of the week C...

Страница 8: ...y to save all your images Please save in your folder You have several different options on where you can save your images Option 1 D or E Users shaalini create your own folder BPAE cells oir Do keep i...

Страница 9: ...oduce intense background noise SD keep HV within 600 800 More than 800 will contribute to intense background noise Under PMT settings tab Mode Select VBF Average average a given number of scans to get...

Страница 10: ...to zoom images only in the center Ideal zoom which satisfy the Nyquist limit can be achieved by zooming till the red arrow any zoom beyond it will result in poor resolution and result in more photoble...

Страница 11: ...the laser power until red pixels disappear Increase Offset until a dusting of blue pixels in the background are observed Click LSM start to capture an image 4 7 How to do a Z stack for a 3D Image xyz...

Страница 12: ...your timelapse experiment Interval FreeRun continues to capture images until it has completed your selected cycle You could always choose an interval of your choice 4 9 Reuse previous settings and ex...

Страница 13: ...h the sample and return the stage to central position d Carefully clean the objective lens with Whatman lens tissue using 100 ethanol e Switch lens back to 10x 0 3 objective lens f Exit the FV31S SW s...

Страница 14: ...ission please contact Bioimaging Group No stage movement Check the coarse fine movement setting near the focus and xy position knobs It is a physical button that has no electronic indication elsewhere...

Страница 15: ...id white or coloured light sometimes red light might be indicative of error III Restart the main controller right at the bottom if none of the steps taken work especially if the machine has been left...

Страница 16: ...and cannot be recovered Restart computer terminal Startup popup error code LAST_OPERATION_ NONCOMPLETED The last user did not shut down the program properly or the program encountered a fatal error du...

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