Thermo Scientific TSQ 8000 Evo Preinstallation Manual Download Page 1

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TSQ 8000 Evo

Mass Spectrometer

Preinstallation Requirements Guide

1R120586-0001 Revision C December 2015

Summary of Contents for TSQ 8000 Evo

Page 1: ...TSQ 8000 Evo Mass Spectrometer Preinstallation Requirements Guide 1R120586 0001 Revision C December 2015 ...

Page 2: ...ientific Inc The contents of this document are subject to change without notice All technical information in this document is for reference purposes only System configurations and specifications in this document supersede all previous information received by the purchaser Thermo Fisher Scientific Inc makes no representations that this document is complete accurate or error free and assumes no resp...

Page 3: ...s time if the installation requirements are not met on the date of the installation To avoid any additional cost please ensure your site is properly prepared 1 All laboratory remodeling has been completed 2 Your TSQ 8000 Evo system is on site 3 The principal operator is scheduled to be available during the installation certification period 4 Doorways hallways and so on are a minimum width of 81 cm...

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Page 5: ... service sid lesulis thermofisher com Phone 33 0 1 60 92 49 50 Fax 33 0 1 60 92 48 99 Germany Im Steingrund 4 6 D 63303 Dreieich E mail service dreieich thermofisher com Phone 49 0 6103 408 1050 Fax 49 0 6103 408 1213 Italy Strada Rivoltana I 20090 Rodano Milano E mail assistenza tecnica it thermofisher com Phone Numero Verde 800 823 162 Fax 39 02 95320 225 Netherlands Takkebijsters 1 NL 4817 BL B...

Page 6: ...Fax 44 0 1442 233 667 Australasia and Asia Australia P O Box 9092 5 Caribbean Drive Scoresby VIC 3179 E mail analyze au thermofisher com Phone 61 39757 4300 Fax 61 9763 1169 Japan C 2F 3 9 Moriya cho Kanagawa ku Yokohama 221 0022 E mail analyze jp thermofisher com Phone 81 45 453 9100 Fax 81 45 453 9110 P R China 7th Floor 7F Tower West Younghe Plaza No 28 Andingmen East Street Dong Cheng District...

Page 7: ...erly Storing Hydrogen xxi Hydrogen Safety Codes Standards and References xxiii Hazardous Substances Precautions xxiv Biological Hazard Warning Note xxiv Venting Toxic Gases xxv Contacting Us xxv Chapter 1 Site Preparation 1 Entrance Requirements 2 Workbench and Space Requirements 3 Lighting Requirements 6 Power Requirements 7 Environmental Requirements 11 Gas Equipment Requirements 12 GC Carrier G...

Page 8: ...0 Evo Preinstallation Requirements Guide Thermo Scientific End User License Agreement Apache OpenOffice 4 0 1 and TraceFinder 4 0 19 End User License Agreement Microsoft Office Professional Plus 2013 and TraceFinder 4 0 27 ...

Page 9: ...MC and safety standards as described in the next section or sections by product name Changes that you make to your system may void compliance with one or more of these EMC and safety standards Changes to your system include replacing a part or adding components options or peripherals not specifically authorized and qualified by Thermo Fisher Scientific To ensure continued compliance with EMC and s...

Page 10: ... specified by Thermo Fisher Scientific could impair any protection provided by the instrument Notice on the Susceptibility to Electromagnetic Transmissions Your instrument is designed to work in a controlled electromagnetic environment Do not use radio frequency transmitters such as mobile phones in close proximity to the instrument THIS DEVICE COMPLIES WITH PART 15 OF THE FCC RULES OPERATION IS S...

Page 11: ...ntific s compliance with these Directives and the recyclers in your country WEEE Konformität Dieses Produkt muss die EU Waste Electrical Electronic Equipment WEEE Richtlinie 2002 96 EC erfüllen Das Produkt ist durch folgendes Symbol gekennzeichnet Thermo Fisher Scientific hat Vereinbarungen mit Verwertungs Entsorgungsfirmen in allen EU Mitgliedsstaaten getroffen damit dieses Produkt durch diese Fi...

Page 12: ... compagnies de recyclage dans chaque état membre de l union européenne et ce produit devrait être collecté ou recyclé par celles ci Davantage d informations sur la conformité de Thermo Fisher Scientific à ces directives les recycleurs dans votre pays et les informations sur les produits Thermo Fisher Scientific qui peuvent aider la détection des substances sujettes à la directive RoHS sont disponi...

Page 13: ...ts as a detection technique Complex mixtures of individual compounds can be injected into the GC either manually or by an autosampler and then separated for presentation to the MS The MS will generate a mass spectrum of the GC eluate and its components The mass spectrum can then be used for qualitative identification as well as accurate and precise quantification of the individual compounds presen...

Page 14: ...m the TSQ 8000 Evo window choose Help TSQ 8000 Evo Help If available for a specific window or dialog box click Help or press the F1 key for information about setting parameters For more information visit www thermoscientific com WARNING Thermo Scientific systems operate safely and reliably under carefully controlled environmental conditions If the equipment is used in a manner not specified by the...

Page 15: ...onitor capable of 1680 1050 resolution 1000 GB hard drive NTFS format Software Microsoft Windows 7 SP1 Operating System 64 bit Thermo Scientific Xcalibur and Foundation1 Thermo Scientific TraceFinder 2 1 Check release notes for compatibility with TSQ Series instrument control software 2 Check release notes for compatibility with Thermo Foundation Xcalibur and TSQ 8000 Evo instrument control softwa...

Page 16: ... a hot surface that could or might cause burn injuries ELECTRICAL SHOCK HAZARD Indicates that an electrical shock could or might occur FIRE HAZARD Indicates a risk of fire or flammability could or might occur FLAMMABLE GAS HAZARD Alerts you to gases that are compressed liquefied or dissolved under pressure and can ignite on contact with an ignition source This symbol indicates this risk could or m...

Page 17: ...VE HAZARD Indicates that exposure to radioactive material could or might occur READ MANUAL Alerts you to carefully read your instrument s documentation to ensure your safety and the instrument s operational ability Failing to carefully read the documentation could or might put you at risk for a physical injury TOXIC SUBSTANCES HAZARD Indicates that exposure to a toxic substance could occur and tha...

Page 18: ...rements for gaseous hydrogen other than eye protection when working with a compressed gas If working with liquid cryogenic hydrogen insulated gloves and protective shoes should be worn in addition to eye protection You should post No Smoking and No Open Flames signs to identify hydrogen sources and cylinders Maintain inspect and leak test all hydrogen sources regularly All hydrogen shutoff valves ...

Page 19: ... and panels of the TSQ 8000 Evo system are firmly attached The vent valve is tightly closed if you vented the system All fittings ferrules and o rings are sealed Hydrogen Connection Guidelines Use the following guidelines to safely connect hydrogen to your system Piping Hydrogen must be delivered to equipment using appropriate piping and be done in such a way as to pose essentially no hazard to en...

Page 20: ...ust be no PTFE tape or other things like plumber s putty used to enhance a seal as this actually is a detriment to a good seal Ideally the best installation would use stainless steel tubing with appropriate gas tight fittings Welding is usually preferred for joints in hydrogen piping systems since welding provides a better connection and reduces the potential for leaks compared to mechanical fitti...

Page 21: ...n the maximum hydrogen production rate of the hydrogen generator Be sure to follow the manufacturers directions about proper use and maintenance of the regulator To prevent the possibility of releasing hydrogen the hydrogen generator should be set to shut down if There is a loss of flow to the ventilation system A hydrogen detector alarms at 25 of the lower flammable limit of hydrogen in air The o...

Page 22: ...0 ft 6 m apart When moving hydrogen cylinders Remove the regulator and replace the cylinder valve cap before moving Move cylinders on cylinder carts or with other appropriate transport devices Never roll or drop a cylinder and never lift a cylinder by its protective cap Bulk hydrogen systems include either gaseous or liquid hydrogen in fixed installations in some gas systems a semi permanent trail...

Page 23: ... Pipework BCGA Code Of Practice CP33 The Bulk Storage of Gaseous Hydrogen at Users Premises CGA G 5 Hydrogen CGA G 5 4 Standard for Hydrogen Piping Systems at Consumer Locations CGA G 5 5 Hydrogen Vent Systems CGA G 5 6 Hydrogen Pipeline Systems CGA G 5 8 High Pressure Hydrogen Piping Systems at Consumer Locations FM Global Property Loss Prevention Data Sheets 7 50 Compressed Gases in Cylinders FM...

Page 24: ... of Test of Surface Burning Characteristics of Building Materials OSHA 29CFR1910 103 1910 103 Hydrogen Hazardous Substances Precautions Biological Hazard Warning Note In laboratories where samples with potential biological hazards are handled the user must label any equipment or parts which might become contaminated with biohazardous material The appropriate warning labels are included with the sh...

Page 25: ...ents therefore be sure to vent the exhaust gases to a fume hood Consult local environmental and safety regulations for instructions in exhausting fumes from your system Contacting Us There are several ways to contact Thermo Fisher Scientific for the information you need To find out more about our products Go to www thermo com ms for information about our products To get local contact information f...

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Page 27: ...pare your site before the Thermo Scientific Field Service Engineer arrives to install the TSQ 8000 Evo mass spectrometer Contents Entrance Requirements Workbench and Space Requirements Lighting Requirements Power Requirements Environmental Requirements Gas Equipment Requirements Receiving Requirements What Happens Next ...

Page 28: ...accommodations Table 1 Shipping Box Dimensions and Weight Box Contents Length Width Height Weight cm in cm in cm in kg lbs TSQ 8000 Evo MS 107 43 71 28 112 45 138 304 TRACE 1300 or TRACE 1310 GC 60 24 80 31 80 31 64 140 AI AS 1310 autosampler 36 14 51 20 36 14 10 22 TriPlus RSH with standard X axis 65 26 100 39 32 13 45 55 99 121 TriPlus RSH with extended X axis 65 26 136 54 32 13 60 132 TriPlus 1...

Page 29: ... lbs TSQ 8000 Evo MS 89 35 40 16 45 18 61 135 Foreline Pump1 46 18 20 8 25 10 24 52 Computer2 48 19 20 8 43 17 12 27 Monitor2 16 7 46 18 32 13 4 8 Keyboard2 23 9 46 18 5 2 1 2 TRACE 1300 GC 60 24 44 17 45 18 353 773 TRACE 1310 GC 67 26 44 17 45 18 353 773 AI 1310 Auto Injector4 28 11 23 9 40 19 6 13 AS 1310 Autosampler4 28 11 41 16 40 19 6 13 TriPlus RSH standard X axis autosampler 80 32 99 39 74 ...

Page 30: ...hat all four of the instrument s feet be positioned on a bench Overhang of the front the back or both ends of the instrument off the bench front or back is acceptable If the depth of your bench is less than the distance between the factory installed feet please contact the factory usaus gcms licensing thermofisher com for your other options of positioning the instrument on such a narrow bench 21 3...

Page 31: ...1 cm 3 ft of clearance above the system This space allows room for optional accessories such as autosamplers and proper heat dissipation 6 Make sure your workbench can support a standard TSQ 8000 Evo system Keep in mind additional instruments add to the total weight Figure 2 Dimensions of the Feet on the Bottom of the TSQ 8000 Evo Instrument Tip Thermo Fisher Scientific requires that all six of th...

Page 32: ...on the foreline pump must be placed on the floor below the system Figure 3 TSQ 8000 Evo MS and TRACE1300 TRACE 1310 GC bench setup Figure 4 TSQ 8000 Evo and TRACE 1300 TRACE 1310 system dimensions Lighting Requirements Use the following guidelines to ensure your site has the proper lighting 1 Ensure that the work area is properly lit You may need an overhead lamp to light your work area TRACE 1310...

Page 33: ... Additional Circuits Additional circuits are needed for the computer or other equipment 120 Vac 6 10 or 230 Vac 10 Note Due to the power draw of the TSQ 8000 Evo MS and GC each instrument must be on its own dedicated circuit These two circuits must be separate from the circuits used for the computer and other equipment such as the autosampler Table 3 System Power Requirements Sheet 1 of 2 Equipmen...

Page 34: ...n square RMS voltage level with typical durations greater than 2 s Sags and swells are slow changes in average root mean square RMS voltage level with typical durations between 50 ms and 2 s Transients even of a few microseconds duration cause electronic devices to fail or to degrade and significantly shorten their lives Transients or impulses are brief voltage excursions of up to several thousand...

Page 35: ...th the required number and type of power cords for your region Table 4 will help you identify the correct power cord for your region and instrument If you need to replace your power cord or buy an additional cord you may use any brand of power cord as long as it is appropriate for your region Table 4 Power cord identification information by region Sheet 1 of 2 Region C13 Power Cords For PC Monitor...

Page 36: ...chuko 250V United Kingdom 250V Danish 250V Italian 250V Israeli 250V Indian 250V Argentina 250V Note The 250V region power cords will work with the 230V circuits Table 4 Power cord identification information by region Sheet 2 of 2 Region C13 Power Cords For PC Monitors and Autosamplers C19 Power Cords For GC and MS ...

Page 37: ...rate and ensure your air conditioning system can handle that amount of heat 2 Ensure that the relative humidity in your laboratory is between 5 and 95 with no condensation A temperature and humidity monitor in your laboratory helps ensure that the climate is within these specifications IMPORTANT If you are not operating the TSQ 8000 Evo MS it is safe to leave the instrument powered on in a room wi...

Page 38: ...u will need a supply of ultra high purity GC carrier gas Typical cylinders are about 23 cm 9 in wide by 140 cm 55 in tall and output 15 000 kPa 2200 psig A single full size tank will last about three months with a typical usage rate of 50 mL min If you have additional detectors or optional accessories please refer to your GC or autosampler manuals for information about gas requirements Note Thermo...

Page 39: ... the GC column is in the inlet of the TSQ 8000 Evo MS Whenever you use hydrogen it is critical to test all connections lines and valves for leaks before using the instrument When performing maintenance be sure to turn off the hydrogen supply Note Thermo Fisher Scientific installation specifications require methane as a CI gas You must have one tank of methane at installation or the field service e...

Page 40: ...gas fittings on the system are leak free Consult your local Environmental and Safety Regulations for information about how to properly exhaust fumes from your laboratory CAUTION INSTRUMENT DAMAGE Do not exceed 240 kPa 35 psig or you could damage the CI reagent gas flow module Table 8 Collision Gas Specifications Gas Type Purity Input Pressure Regulator Connector Argon 99 999 407 421 kPa 59 61 psig...

Page 41: ...gen and total hydrocarbons should be less than 1 ppm to avoid high background noise and prevent contamination The GC is equipped with two intake filters that trap moisture oxygen and hydrocarbons Store gas tanks and bottles properly so they will not damage cables or gas lines Ensure they are secured in accordance with standard safety practices CAUTION If your TRACE 1300 TRACE 1310 and PTV injector...

Page 42: ... off the GC and shut off the hydrogen at its source before venting the TSQ 8000 Evo MS If you use a hydrogen pump ensure it has a palladium drier Remove as many sources of ignition as possible from your laboratory Sources can include open flames electrostatic discharges or devices that spark Do not open a cylinder of hydrogen without a regulator attached because it may self ignite Receiving Requir...

Page 43: ... out the TSQ 8000 Evo Installation Request Form After the Installation Request Form is received Customer Support will contact you to schedule the installation of your system It is important to confirm that all the requirements on the form are met BEFORE the Field Service Engineer arrives The Field Service Engineer will install the system and confirm that all performance tests pass ...

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Page 45: ...e for any user OpenOffice is free for use by everybody You may take this copy of OpenOffice and install it on as many computers as you like and use it for any purpose you like including commercial government public administration and educational use For further details see the license text delivered together with OpenOffice or http www openoffice org license html Why is OpenOffice free for any use...

Page 46: ...d form for making modifications including but not limited to software source code documentation source and configuration files Object form shall mean any form resulting from mechanical transformation or translation of a Source form including but not limited to compiled object code generated documentation and conversions to other media types Work shall mean the work of authorship whether in Source ...

Page 47: ...with the Work to which such Contribution s was submitted If You institute patent litigation against any entity including a cross claim or counterclaim in a lawsuit alleging that the Work or a Contribution incorporated within the Work constitutes direct or contributory patent infringement then any patent licenses granted to You under this License for that Work shall terminate as of the date such li...

Page 48: ... reproducing the content of the NOTICE file 7 Disclaimer of Warranty Unless required by applicable law or agreed to in writing Licensor provides the Work and each Contributor provides its Contributions on an AS IS BASIS WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND either express or implied including without limitation any warranties or conditions of TITLE NON INFRINGEMENT MERCHANTABILITY or FITNES...

Page 49: ...e Software directly against the Customer B LICENSE GRANT 1 Thermo grants to the Customer a non exclusive non transferable license to use the Software and any accompanying manuals and reference and instructional materials Documentation solely for the purposes for which the Software is intended as set forth in the Documentation and only for Customer s internal business scientific and research purpos...

Page 50: ...s to the Software 2 THERMO AND ITS INFORMATION PARTNERS PROVIDE THE SOFTWARE AND DOCUMENTATION TO CUSTOMER ON AN AS IS BASIS AND MAKE NO REPRESENTATIONS OR WARRANTIES OF ANY KIND WITH RESPECT TO THE SOFTWARE AND DOCUMENTATION INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT THERMO DISCLAIMS ALL WARRANTIES WITH RESPECT TO THIRD PART...

Page 51: ... without giving effect to the principles of conflict of laws thereof and both parties consent to the jurisdiction of the federal and state courts situated in the Commonwealth of Massachusetts in any action arising under this Agreement In the event of any legal proceeding between Thermo and Customer relating to this Agreement neither party may claim the right to a trial by jury and both parties wai...

Page 52: ...this Agreement in the event Customer breaches any term of this Agreement or becomes insolvent files or has filed against it a petition in bankruptcy or undergoes a reorganization pursuant to a petition in bankruptcy filed with respect to it 2 Upon termination Customer will unless otherwise agreed to in writing by Thermo immediately return to Thermo the Software and Documentation and all copies the...

Page 53: ...E SOFTWARE YOU AGREE TO ALL OF THESE TERMS AND CONSENT TO THE TRANSMISSION OF CERTAIN INFORMATION DURING ACTIVATION AND FOR INTERNET BASED FEATURES OF THE SOFTWARE IF YOU DO NOT ACCEPT AND COMPLY WITH THESE TERMS YOU MAY NOT USE THE SOFTWARE OR FEATURES Instead you should return it to the place where you purchased the software license for a refund or credit How can I use the software We do not sel...

Page 54: ...osoft or its affiliate to confirm the license is associated with the licensed computer This process is called activation Because activation is meant to identify unauthorized changes to the licensing or activation functions of the software and to otherwise prevent unlicensed use of the software you have no right to use the software after the time permitted for activation and you may not bypass or c...

Page 55: ...upgrade software and replaces the agreement for the software from which you upgraded ADDITIONAL TERMS A LICENSE RIGHTS AND MULTI USER SCENARIOS 1 Computer In this agreement computer means a hardware system whether physical or virtual with a storage device capable of running the software A hardware partition or blade is considered to be a computer 2 Multiple or Pooled Connections You may not use ha...

Page 56: ...lace of business if the dispute meets all requirements to be heard in the small claims court You may litigate in small claims court whether or not you negotiated informally first 4 BINDING ARBITRATION IF YOU AND THE LICENSOR OR MICROSOFT DO NOT RESOLVE ANY DISPUTE BY INFORMAL NEGOTIATION OR IN SMALL CLAIMS COURT ANY OTHER EFFORT TO RESOLVE THE DISPUTE WILL BE CONDUCTED EXCLUSIVELY BY BINDING ARBIT...

Page 57: ...y reasonably accrues for investigating preparing and pursuing your claim in arbitration The arbitrator will determine the amounts b Disputes Involving More Than 75 000 The AAA rules will govern payment of filing fees and the AAA s and arbitrator s fees and expenses c Disputes Involving Any Amount In any arbitration you commence the licensor will seek its AAA or arbitrator s fees and expenses or yo...

Page 58: ...the laws of your state or country do not permit it to do so D ACTIVATION 1 More on How Activation Works During activation the software will send information about the software and your computer to Microsoft This information includes the version license version language and product key of the software the Internet protocol address of the computer and information derived from the hardware configurat...

Page 59: ...tion to identify or contact you CEIP will also periodically download a small file to your computer This file helps us collect information about problems that you have while using the software When available new help information about the errors might also be automatically downloaded To learn more about CEIP see microsoft com products ceip EN US privacypolicy mspx 3 Online Features and Content Feat...

Page 60: ... microsoft com r rlidOOPrivacyState15HighLight clid 1033 then clicking the Privacy Statement link in the Important Information section at the bottom of the page F ADDITIONAL LICENSING REQUIREMENTS AND OR USE RIGHTS 1 Third Party Programs The software may include third party programs that Microsoft not the third party licenses to you under this agreement Notices if any for the third party program a...

Page 61: ...oing to microsoft com about legal en us intellectualproperty useterms default aspx You can also review the terms at any of the links in this agreement by typing the URLs into your browser address bar and you agree to do so You agree that for each service that is governed by this agreement and also specific terms linked in this agreement you will read the terms for that service before using the ser...

Page 62: ...SEQUENTIAL OR INCIDENTAL DAMAGES ARISING FROM OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THE SOFTWARE OR THE SOFTWARE APPLICATION OR SUITE OF APPLICATIONS WITH WHICH YOU ACQUIRED THE SOFTWARE INCLUDING WITHOUT LIMITATION PENALTIES IMPOSED BY GOVERNMENT THIS LIMITATION WILL APPLY EVEN IF ANY REMEDY FAILS OF ITS ESSENTIAL PURPOSE IN NO EVENT SHALL MICROSOFT BE LIABLE FOR ANY AMOUNT IN EXCESS OF...

Page 63: ...ly for Customer s internal business scientific and research purposes 2 The Customer is authorized to install and use two 2 copies of the Software and maintain one 1 uninstalled copy for backup purposes T 3 The Software and the Documentation are and shall remain the property of Thermo or an Information Partner as applicable and are protected by all applicable intellectual property copyright and pat...

Page 64: ...RE AND DOCUMENTATION BY THE CUSTOMER OR ANY OTHER PARTY AND THERMO AND INFORMATION PARTNERS SHALL NOT BE LIABLE FOR LOSS OF PROFITS USE BUSINESS REVENUES DATA INFORMATION OR GOODWILL OR FOR INCIDENTAL CONSEQUENTIAL INDIRECT PUNITIVE OR EXEMPLARY DAMAGES AS A RESULT OF SUCH USE EVEN IF THERMO AND OR INFORMATION PARTNERS ARE EXPRESSLY MADE AWARE OF THE POSSIBILITY THEREOF OR ARE NEGLIGENT Thermo can...

Page 65: ...ssly excluded G EXPORT COMPLIANCE 1 Customer acknowledges that the Software and Documentation is subject to export controls of the U S Government which may include those of the Export Administration Regulations of the U S Department of Commerce Customer agrees to comply with the Export Administration Regulations and all other applicable laws and regulations relating to the export re export or impo...

Page 66: ... to it 2 Upon termination Customer will unless otherwise agreed to in writing by Thermo immediately return to Thermo the Software and Documentation and all copies thereof and will erase all electronic storage of copies of the Software 3 Termination of this Agreement will not affect any obligation or liability of Customer arising prior to termination and the following sections shall survive 2b 2c 2...

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