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11-0027-48 AC, 2007-09 • p2

System Preparation

1

  Starting the system 

a)  Press the button on the back of the system.
b)  Wait until the system self-test has been completed 

(30-40 seconds). 

Templates

 

is displayed when the 

system is ready to use.

2

  Starting the computer

a)  Start the computer.
b)  Start PrimeView™.
c)  Check the communication between system and 

computer. 

Tip! If communication has been established,  the 
text 

Controlled By: prime

 should be displayed at 

the lower right corner of the screen. If not, check the 
connections.

3

  Purging the system flow path

a) 

If the flow path is filled with storage solution (e.g. 
ethanol 20%), remove it as follows:

•  Place the three brown waste tubings in waste.
•  Set all inlet tubings (B, A1, …) that will be used in 

water (see the appropriate cue card).

•  Select the application template 

System Wash 

Method

, select the inlets to be washed. Press 

OK

.

Note: Wait at least 15 minutes before using the 
system after the lamp has been turned on to avoid 
drifting UV base line. 

c) 

If using pH:

 

Calibrate the pH. The pH must be calibrated every day. 
See 

ÄKTAprime plus User Manual

 for instructions.

5

  Checking the flow rate

a)  Set the injection valve to position WASTE. 

b)  Start the flow (1-50 ml/min). 

c)  Use a graduated glass cylinder to collect at the WASTE 

outlet (port 5). Collect during at least one minute.

Note:

 Inaccurate flow rate may be due to air in the 

pump. If this is the case, flush the pump with buffer 
and try again. If the problem persists, flush the system 

with ehtanol or methanol followed by water. 

System Wash Method

Select Buffer V. Pos

B,A:_,_,_,_,_,_,_,_ OK

Application Template

Templates

b) 

If there are large amounts of air in the tubing:

 

Fill the tubing using Purge kit P-950. See 

ÄKTAprime™ 

plus User Manual

 for detailed instructions.

4

  Preparing the monitors

a)  Check the UV lamp filter position and the lamp 

position.

b)  Check that the UV lamp is on. 

Lamp

(on)

Set Parameters

Setup and

Calibration

Set Delay UV to Frac

(x µl)

Set Parameters

6

  Preparing the fraction collector

a)  Check that the delay volume is correct. The delay 

volume is equal to the volume between the UV flow 

cell and the fraction collector (default 380 µl). 

d)

 

Check that the sensor is in the 
correct position for the tube 
size. The eluent tubing should be 
positioned above the center of the 
collection tube. Use the red sensor 
control to position the tube holder.

b)  Fill the fraction collector 

with tubes

*

.

c)  Adjust the height of the 

delivery arm so that the 
horizontal mark on the 
tube sensor is at the same 
level as the top of the 
collection tubes.

Lock knob

5 mm

Sensor Control

*

  See each cue card for information on the number of tubes to be 

used.

Summary of Contents for AKTAprime plus

Page 1: ...tein purification gradient elution 10 IMAC purification any metal 12 On column refolding 14 GST tagged protein purification 16 Strep II tagged protein purification 18 MBP tagged protein purification 2...

Page 2: ...d glass cylinder to collect at the WASTE outlet port 5 Collect during at least one minute Note Inaccurate flow rate may be due to air in the pump If this is the case flush the pump with buffer and try...

Page 3: ...t Inject with a syringe 5 times the loop volume of water or binding buffer through the injection fill port c Connect the column between port 1 on the injection valve 7 port valve and the UV flow cell...

Page 4: ...6 on the injection valve Use a syringe to manually fill the loop Note If the same sample is applied repeatedly a Superloop can be used For information of how to use it see the instructions for the Sup...

Page 5: ...der Troubleshooting High backpressure Column clogged Clean the column according to instructions Make sure the sample has been centrifuged and or filtered through a 0 45 m filter System clogged Replace...

Page 6: ...l the fraction collector rack with 18 mm tubes minimum 25 and position the white plate on the fractionation arm against the first tube e Connect a sample loop large enough for your sample between port...

Page 7: ...84 Troubleshooting High backpressure Column clogged Clean the column according to instructions Make sure the sample has been centrifuged and or filtered through a 0 45 m filter System clogged Replace...

Page 8: ...or by buffer exchange using HiTrap Desalting or HiPrep 26 10 Desalting b Pass the sample through a 0 45 m filter Note If HisTrap FF crude column is used no filtration nor clarification of the sample i...

Page 9: ...ssure 0 3 MPa clean system according to manual No binding Check that the correct column is used Check that the inlet tubing from each buffer is connected to the correct inlet port Check that the compo...

Page 10: ...m a Place the inlet tubing from port A1 8 port valve in the binding buffer and the tubing from port B 2 port valve in the elution buffer b Place the three brown waste tubings in waste c Connect the co...

Page 11: ...piece of tubing Check pressure If backpressure 0 3 MPa clean system according to manual No binding Check that the correct column is used Check that the inlet tubing from each buffer is connected to t...

Page 12: ...e elution buffer b Place the three brown waste tubings in waste c Connect the column between port 1 on the injection valve 7 port valve and the UV flow cell see Ordering information on next page for s...

Page 13: ...t tubing from each buffer is connected to the correct inlet port Check that the composition and pH of the buffers are correct Check that the sample has been adjusted to binding buffer conditions Check...

Page 14: ...imidazole is protein dependent and if the protein of interest elutes or does not bind at a certain imidazole concentration then reduce the concentration Include the same imidazole concentration as in...

Page 15: ...omposition and pH of the buffers are correct Check that the sample has been adjusted to binding buffer conditions Check that your sample contains target protein No elution Check that the inlet tubing...

Page 16: ...ill the fraction collector rack with 18 mm tubes minimum 10 and position the white plate on the fractionation arm against the first tube e Connect a sample loop large enough for your sample between po...

Page 17: ...clean system according to manual No binding Check that the correct column is used Check that the inlet tubing from each buffer is connected to the correct inlet port Check that the composition and pH...

Page 18: ...your sample between port 2 and 6 on the injection valve Use a syringe to manually fill the loop Note If a Superloop is needed additional information is supplied in the instructions for Superloop The n...

Page 19: ...that the correct column is used Check that the inlet tubing from each buffer is connected to the correct inlet port Check that the composition and pH of the buffers are correct Check that the sample...

Page 20: ...r your sample between port 2 and 6 on the injection valve Use a syringe to manually fill the loop Note If a Superloop is needed additional information is supplied in the instructions for Superloop The...

Page 21: ...at the correct column is used Check that the inlet tubing from each buffer is connected to the correct inlet port Check that the composition and pH of the buffers are correct Check that the sample has...

Page 22: ...flow cell see Ordering information on next page for suitable columns d Fill the fraction collector rack with 18 mm tubes minimum 10 and position the white plate on the fractionation arm against the f...

Page 23: ...tem clogged Replace the column with a piece of tubing Check pressure If backpressure 0 3 MPa clean system according to manual No binding Check that the correct column is used Check that the inlet tubi...

Page 24: ...ter 3 Preparing the system a Place the inlet tubing from port A1 8 port valve in the binding buffer and the tubing from port B 2 port valve in the elution buffer b Place the three brown waste tubings...

Page 25: ...n with a piece of tubing Check pressure If backpressure 0 3 MPa clean system according to manual No binding Check that the correct column is used Check that the inlet tubing from each buffer is connec...

Page 26: ...e for suitable columns d Fill the fraction collector rack with 18 mm tubes minimum 15 and position the white plate on the fractionation arm against the first tube e Connect a sample loop large enough...

Page 27: ...ck that the inlet tubing from each buffer is connected to the correct inlet port Check that the composition and pH of the buffers are correct Check that the sample has been adjusted to binding buffer...

Page 28: ...collector rack with 18 mm tubes minimum 20 and position the white plate on the fractionation arm against the first tube e Connect a sample loop large enough for your sample between port 2 and 6 on the...

Page 29: ...is used Check that the inlet tubing from each buffer is connected to the correct inlet port Check that the composition and pH of the buffers are correct Check that the sample has been adjusted to bin...

Page 30: ...or rack with 18 mm tubes minimum 40 and position the white plate on the fractionation arm against the first tube e Connect a sample loop large enough for your sample between port 2 and 6 on the inject...

Page 31: ...om each buffer is connected to the correct inlet port Check that the composition and pH of the buffers are correct Check that the sample has been adjusted to binding buffer conditions Check that your...

Page 32: ...and the UV flow cell see Ordering information on next page for suitable columns d Fill the fraction collector rack with 18 mm tubes minimum 40 and position the white plate on the fractionation arm aga...

Page 33: ...that the inlet tubing from each buffer is connected to the correct inlet port Check that the composition and pH of the buffers are correct If the compostion and pH of the buffers are correct but ther...

Page 34: ...ve 7 port valve and the UV flow cell see Ordering information on next page for suitable columns d Fill the fraction collector rack with 18 mm tubes minimum 40 and position the white plate on the fract...

Page 35: ...o the correct inlet port Check that the composition and pH of the buffers are correct If the compostion and pH of the buffers are correct but there is still no binding a If the protein of interest doe...

Page 36: ...17 5111 01 HiTrap IgY Purification 5 ml 0 5 5 2 5 25 50 50 40 17 5247 01 HisTrap HP 1 ml 0 5 1 0 5 5 20 5 0 17 5248 02 HisTrap HP 5 ml 0 5 5 2 5 25 100 25 0 17 5319 01 HisTrap FF 1 ml 0 5 1 0 5 5 20...

Page 37: ...5 1 1 5 2 20 5 17 5163 01 HiTrap ANX FF high sub 5 ml 0 5 5 5 25 10 100 25 17 5158 01 HiTrap Q XL 1 ml 0 5 1 1 5 2 20 5 17 5159 01 HiTrap Q XL 5 ml 0 5 5 5 25 10 100 25 17 1151 01 HiTrap SP HP 1 ml 0...

Page 38: ...1 HiPrep 16 10 Phenyl FF low sub 0 5 5 5 100 40 400 100 17 5097 01 HiPrep 16 10 Octyl FF 0 5 5 5 100 40 400 100 17 5096 01 HiPrep 16 10 Butyl FF 0 5 5 5 100 40 400 100 17 1085 01 HiLoad 16 10 Phenyl S...

Page 39: ...11 0027 48 AC 2007 09 p39...

Page 40: ...which has been immobilized to GE Health care s chromatography media Strep Tactin is covered by US patent number 6 103 493 and equivalent patents and patent applications in other countries The purchas...

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