QX200 Droplet Reader and QuantaSoft Software Instruction Manual | 19
18 | QX200 Droplet Reader and QuantaSoft Software Instruction Manual
18 | QX200 Droplet Reader and QuantaSoft Software Instruction Manual
Chapter 3 Using QuantaSoft Software
3.3.2 Viewing Scatter Plots
Click
2D Amplitude
to view the channel 1 vs. channel 2 scatter plot and enable options for manually or
automatically adjusting the thresholds used in assigning positives and negatives for each detection channel.
■
■
To reset automatic thresholds for positives and negatives, click
Auto Analyze
■
■
To manually assign thresholds:
– Use the thresholding crosshair to assign classification regions for the whole plot (the clustering tool is
disabled when viewing the plot in heat map mode)
– Use the ellipse, rectangle, or lasso threshold adjustment tool to classify a region of the plot. Click the tool,
then click the region type in the working cluster selector. Use the tool to select the region within the plot
Tip:
Mouse over any well in the well selector to preview data from that well in the scatter plot.
Fig. 19. Viewing scatter plots.
Threshold adjustment options available in the scatter plot are shown. Threshold values are indicated by
the pink lines in the plot.
Threshold
adjustment tools
Ch2 threshold
Ch 1
threshold
Working cluster
selector
Ch1+/Ch2–
Ch1+/Ch2+
Ch1–/Ch2–
Ch1–/Ch2+
Ch1+/Ch2–
Ch1+/Ch2+
Ch1–/Ch2+
Ch1–/Ch2–
Reset automatic
threshold settings
Threshold settings
Display
multicolor
heat map
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